Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 AC007842.1-201ENST00000597336 2039 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.3□□□□□ -1.4
MTHFRP42898 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
MTHFRP42898 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.3□□□□□ -1.4
MTHFRP42898 NAMPTP1-201ENST00000440465 2514 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.3□□□□□ -1.4
MTHFRP42898 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.3□□□□□ -1.4
MTHFRP42898 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
MTHFRP42898 U3.7-201ENST00000363668 216 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.3□□□□□ -1.4
MTHFRP42898 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 MIR433-201ENST00000384837 93 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 SNRPEP6-201ENST00000407465 277 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 RNU4-34P-201ENST00000410431 124 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.3□□□□□ -1.4
MTHFRP42898 CBX1P3-201ENST00000413296 527 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 BMS1P17-202ENST00000416720 316 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.3□□□□□ -1.4
MTHFRP42898 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.3□□□□□ -1.4
MTHFRP42898 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.3□□□□□ -1.4
MTHFRP42898 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.3□□□□□ -1.4
MTHFRP42898 SPRYD7P1-201ENST00000443861 570 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 AL133445.1-201ENST00000467051 452 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.3□□□□□ -1.4
MTHFRP42898 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.3□□□□□ -1.4
MTHFRP42898 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.3□□□□□ -1.4
MTHFRP42898 RNA5SP400-201ENST00000517155 111 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.3□□□□□ -1.4
MTHFRP42898 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
MTHFRP42898 AC233702.7-202ENST00000582941 211 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.3□□□□□ -1.4
MTHFRP42898 AC018445.2-201ENST00000622987 260 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 AC012254.5-201ENST00000623573 478 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.3□□□□□ -1.4
MTHFRP42898 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.3□□□□□ -1.4
MTHFRP42898 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
MTHFRP42898 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.3□□□□□ -1.4
MTHFRP42898 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
MTHFRP42898 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 MTCO1P7-201ENST00000419523 1542 ntBASIC6.3□□□□□ -1.4
MTHFRP42898 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
MTHFRP42898 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
MTHFRP42898 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.29□□□□□ -1.4
MTHFRP42898 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MTHFRP42898 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
MTHFRP42898 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MTHFRP42898 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.29□□□□□ -1.4
MTHFRP42898 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.29□□□□□ -1.4
MTHFRP42898 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.29□□□□□ -1.4
MTHFRP42898 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MTHFRP42898 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
MTHFRP42898 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
MTHFRP42898 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MTHFRP42898 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
MTHFRP42898 SPTLC1P2-201ENST00000407089 121 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 AP000534.2-201ENST00000412729 568 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC007394.1-201ENST00000421941 531 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 KIF4CP-201ENST00000422742 1279 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.29□□□□□ -1.4
MTHFRP42898 PFN1P6-201ENST00000476786 399 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 AC092824.1-201ENST00000483524 576 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MTHFRP42898 NPM1P27-201ENST00000502784 830 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 AC138866.2-201ENST00000508650 584 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
MTHFRP42898 TRAV11-201ENST00000539512 339 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.29□□□□□ -1.4
MTHFRP42898 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.29□□□□□ -1.4
MTHFRP42898 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.29□□□□□ -1.4
MTHFRP42898 IGBP1P1-201ENST00000554337 1009 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 AC234775.3-201ENST00000564612 656 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC073429.2-201ENST00000569694 1444 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC015802.2-201ENST00000589690 189 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.29□□□□□ -1.4
MTHFRP42898 AC004948.1-201ENST00000609858 672 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 AC239803.2-201ENST00000610161 430 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 AL021918.2-201ENST00000613415 194 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 AP005212.4-201ENST00000614206 710 ntBASIC6.29□□□□□ -1.4
MTHFRP42898 TCL6_3.1-201ENST00000619064 137 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms