Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
COL8A2P25067 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.88□□□□□ -1.63
COL8A2P25067 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
COL8A2P25067 AL137141.1-201ENST00000624622 4836 ntBASIC4.88□□□□□ -1.63
COL8A2P25067 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
COL8A2P25067 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC4.87□□□□□ -1.63
COL8A2P25067 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL8A2P25067 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COL8A2P25067 MRE11P1-201ENST00000464884 2127 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.87□□□□□ -1.63
COL8A2P25067 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.87□□□□□ -1.63
COL8A2P25067 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 AL159987.1-201ENST00000347911 293 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 RNU6-316P-201ENST00000391027 107 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 RMRPP5-201ENST00000411156 267 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.87□□□□□ -1.63
COL8A2P25067 AL022331.1-201ENST00000429025 477 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 AL121776.1-201ENST00000429337 372 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 AC005297.1-201ENST00000444765 862 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.87□□□□□ -1.63
COL8A2P25067 FRG2FP-204ENST00000453982 852 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.87□□□□□ -1.63
COL8A2P25067 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.87□□□□□ -1.63
COL8A2P25067 AC093719.1-201ENST00000480427 441 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.87□□□□□ -1.63
COL8A2P25067 AC138866.2-201ENST00000508650 584 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.87□□□□□ -1.63
COL8A2P25067 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.87□□□□□ -1.63
COL8A2P25067 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.87□□□□□ -1.63
COL8A2P25067 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL8A2P25067 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.87□□□□□ -1.63
COL8A2P25067 AC096996.1-201ENST00000563813 325 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.87□□□□□ -1.63
COL8A2P25067 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.87□□□□□ -1.63
COL8A2P25067 AL589674.2-201ENST00000604304 337 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 FAM72A-208ENST00000607379 1139 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 MIR6768-201ENST00000610734 72 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 AC109309.2-201ENST00000612597 332 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 AL691477.1-201ENST00000624398 162 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL8A2P25067 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL8A2P25067 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
COL8A2P25067 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 NCOA4P2-201ENST00000340589 1813 ntBASIC4.87□□□□□ -1.63
COL8A2P25067 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
COL8A2P25067 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.87□□□□□ -1.63
COL8A2P25067 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
COL8A2P25067 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
COL8A2P25067 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.87□□□□□ -1.63
COL8A2P25067 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.87□□□□□ -1.63
COL8A2P25067 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
COL8A2P25067 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
COL8A2P25067 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.86□□□□□ -1.63
COL8A2P25067 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.86□□□□□ -1.63
COL8A2P25067 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
COL8A2P25067 GTF2IP4-201ENST00000453092 2054 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 AL121835.1-201ENST00000404250 354 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 OR6E1P-201ENST00000414424 923 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 RPS26P38-201ENST00000414476 348 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.86□□□□□ -1.63
COL8A2P25067 AC019205.1-201ENST00000421830 730 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.86□□□□□ -1.63
COL8A2P25067 USP24P1-201ENST00000433802 779 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
COL8A2P25067 OR7E157P-201ENST00000494376 911 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.86□□□□□ -1.63
COL8A2P25067 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.86□□□□□ -1.63
COL8A2P25067 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 AC008429.4-201ENST00000521201 182 ntBASIC4.86□□□□□ -1.63
COL8A2P25067 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.86□□□□□ -1.63
COL8A2P25067 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL8A2P25067 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.86□□□□□ -1.63
COL8A2P25067 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.86□□□□□ -1.63
COL8A2P25067 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.86□□□□□ -1.63
COL8A2P25067 AC104695.2-201ENST00000605056 775 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms