Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
POLR2AP24928 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
POLR2AP24928 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.77□□□□□ -1.33
POLR2AP24928 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
POLR2AP24928 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.77□□□□□ -1.33
POLR2AP24928 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
POLR2AP24928 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
POLR2AP24928 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
POLR2AP24928 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
POLR2AP24928 AL390774.1-201ENST00000411924 246 ntBASIC6.77□□□□□ -1.33
POLR2AP24928 AL117351.1-201ENST00000438864 766 ntBASIC6.77□□□□□ -1.33
POLR2AP24928 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.77□□□□□ -1.33
POLR2AP24928 FAR2P1-206ENST00000449736 709 ntBASIC6.77□□□□□ -1.33
POLR2AP24928 RAB28P2-201ENST00000454299 641 ntBASIC6.77□□□□□ -1.33
POLR2AP24928 RNU1-88P-201ENST00000459274 128 ntBASIC6.77□□□□□ -1.33
POLR2AP24928 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.77□□□□□ -1.33
POLR2AP24928 RN7SL591P-201ENST00000496150 292 ntBASIC6.77□□□□□ -1.33
POLR2AP24928 SNRPCP2-201ENST00000504370 475 ntBASIC6.77□□□□□ -1.33
POLR2AP24928 AC111000.5-201ENST00000506559 1178 ntBASIC6.77□□□□□ -1.33
POLR2AP24928 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.77□□□□□ -1.33
POLR2AP24928 OR4R2P-201ENST00000530815 597 ntBASIC6.77□□□□□ -1.33
POLR2AP24928 AL049779.2-201ENST00000553847 315 ntBASIC6.77□□□□□ -1.33
POLR2AP24928 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.77□□□□□ -1.33
POLR2AP24928 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.77□□□□□ -1.33
POLR2AP24928 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
POLR2AP24928 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
POLR2AP24928 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.76□□□□□ -1.33
POLR2AP24928 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.76□□□□□ -1.33
POLR2AP24928 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
POLR2AP24928 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
POLR2AP24928 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
POLR2AP24928 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
POLR2AP24928 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC6.76□□□□□ -1.33
POLR2AP24928 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC6.76□□□□□ -1.33
POLR2AP24928 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.76□□□□□ -1.33
POLR2AP24928 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
POLR2AP24928 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.76□□□□□ -1.33
POLR2AP24928 FAM32BP-201ENST00000344033 333 ntBASIC6.76□□□□□ -1.33
POLR2AP24928 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.76□□□□□ -1.33
POLR2AP24928 RNU6-1176P-201ENST00000390955 107 ntBASIC6.76□□□□□ -1.33
POLR2AP24928 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
POLR2AP24928 OR51A6P-201ENST00000418680 1004 ntBASIC6.76□□□□□ -1.33
POLR2AP24928 VDAC1P2-201ENST00000423609 850 ntBASIC6.76□□□□□ -1.33
POLR2AP24928 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.76□□□□□ -1.33
POLR2AP24928 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC6.76□□□□□ -1.33
POLR2AP24928 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.76□□□□□ -1.33
POLR2AP24928 RPL7P6-201ENST00000480903 738 ntBASIC6.76□□□□□ -1.33
POLR2AP24928 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
POLR2AP24928 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.76□□□□□ -1.33
POLR2AP24928 AC026407.1-201ENST00000518369 204 ntBASIC6.76□□□□□ -1.33
POLR2AP24928 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.76□□□□□ -1.33
POLR2AP24928 RPL10P14-201ENST00000565265 298 ntBASIC6.76□□□□□ -1.33
POLR2AP24928 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.76□□□□□ -1.33
POLR2AP24928 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.76□□□□□ -1.33
POLR2AP24928 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.76□□□□□ -1.33
POLR2AP24928 ELOCP28-201ENST00000590044 317 ntBASIC6.76□□□□□ -1.33
POLR2AP24928 AC027334.1-201ENST00000603257 310 ntBASIC6.76□□□□□ -1.33
POLR2AP24928 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.76□□□□□ -1.33
POLR2AP24928 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
POLR2AP24928 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
POLR2AP24928 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
POLR2AP24928 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
POLR2AP24928 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
POLR2AP24928 AP002991.2-201ENST00000623807 2801 ntBASIC6.76□□□□□ -1.33
POLR2AP24928 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
POLR2AP24928 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
POLR2AP24928 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
POLR2AP24928 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
POLR2AP24928 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
POLR2AP24928 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
POLR2AP24928 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC6.75□□□□□ -1.33
POLR2AP24928 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.75□□□□□ -1.33
POLR2AP24928 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
POLR2AP24928 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
POLR2AP24928 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.75□□□□□ -1.33
POLR2AP24928 MTCYBP15-201ENST00000433123 1127 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 OR6D1P-201ENST00000436165 939 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 BZW1P1-201ENST00000454901 1240 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 AC103563.5-201ENST00000455643 364 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC6.75□□□□□ -1.33
POLR2AP24928 AC015864.1-201ENST00000496512 544 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.75□□□□□ -1.33
POLR2AP24928 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.75□□□□□ -1.33
POLR2AP24928 AC023158.1-201ENST00000561632 1025 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 AC018552.1-201ENST00000562099 811 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.75□□□□□ -1.33
POLR2AP24928 AC069307.1-201ENST00000602820 447 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 XKRY2-202ENST00000623874 1581 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 XKRY-202ENST00000624960 1581 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
POLR2AP24928 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.75□□□□□ -1.33
POLR2AP24928 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC6.75□□□□□ -1.33
POLR2AP24928 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.75□□□□□ -1.33
POLR2AP24928 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms