Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL683826.1-201ENST00000624104 627 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 AC004943.3-201ENST00000624116 600 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 AL035425.4-201ENST00000624509 1063 ntBASIC7.87□□□□□ -1.15
ERCC3P19447 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.87□□□□□ -1.15
ERCC3P19447 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.87□□□□□ -1.15
ERCC3P19447 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
ERCC3P19447 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
ERCC3P19447 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.87□□□□□ -1.15
ERCC3P19447 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
ERCC3P19447 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ERCC3P19447 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.86□□□□□ -1.15
ERCC3P19447 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ERCC3P19447 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ERCC3P19447 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 RNU4-92P-201ENST00000363783 136 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 RNU4-51P-201ENST00000364206 140 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 RNA5SP140-201ENST00000364524 92 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC7.86□□□□□ -1.15
ERCC3P19447 UBBP1-201ENST00000392399 473 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 RPL23AP85-201ENST00000421838 433 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.86□□□□□ -1.15
ERCC3P19447 AL353093.1-201ENST00000441292 436 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 KATNBL1P3-201ENST00000443475 909 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.86□□□□□ -1.15
ERCC3P19447 RPL23AP28-201ENST00000448062 470 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 RBMY2TP-201ENST00000451162 947 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
ERCC3P19447 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 AC118758.1-202ENST00000454719 225 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 EIF4A2P4-201ENST00000458691 1196 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC104339.1-201ENST00000465478 348 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC131233.1-201ENST00000479200 955 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 RPL23AP37-201ENST00000479658 549 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.86□□□□□ -1.15
ERCC3P19447 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC7.86□□□□□ -1.15
ERCC3P19447 AC055733.3-201ENST00000505214 523 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.86□□□□□ -1.15
ERCC3P19447 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 AC104108.1-201ENST00000509930 412 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 SNX18P23-201ENST00000510867 677 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC010486.3-201ENST00000511602 785 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 IGHVII-60-1-201ENST00000519079 256 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 DEFB130C-202ENST00000530001 230 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC140063.1-201ENST00000541343 259 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 AC023050.2-201ENST00000544968 387 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC027667.1-201ENST00000545814 304 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.86□□□□□ -1.15
ERCC3P19447 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 AL020997.3-201ENST00000602843 359 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC012175.1-201ENST00000603755 531 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC020765.1-201ENST00000604296 328 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 OR2BH1P-201ENST00000608850 864 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ERCC3P19447 AC012676.3-201ENST00000614983 479 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC005277.2-201ENST00000617898 390 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AL591926.1-201ENST00000620542 217 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 AC004836.1-201ENST00000623032 634 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 OR7A1P-202ENST00000641542 1158 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
ERCC3P19447 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
ERCC3P19447 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ERCC3P19447 TATDN2P3-201ENST00000452855 3665 ntBASIC7.86□□□□□ -1.15
ERCC3P19447 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
ERCC3P19447 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
ERCC3P19447 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
ERCC3P19447 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
ERCC3P19447 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.85□□□□□ -1.15
ERCC3P19447 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.85□□□□□ -1.15
ERCC3P19447 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
ERCC3P19447 ZNF806-201ENST00000438300 1774 ntBASIC7.85□□□□□ -1.15
ERCC3P19447 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
ERCC3P19447 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.85□□□□□ -1.15
ERCC3P19447 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.85□□□□□ -1.15
ERCC3P19447 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
ERCC3P19447 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
ERCC3P19447 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
ERCC3P19447 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms