Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGA1P17096 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGA1P17096 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGA1P17096 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGA1P17096 RNU4-2-201ENST00000365668 141 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HMGA1P17096 SNORA70.9-201ENST00000384370 135 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGA1P17096 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGA1P17096 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.88□□□□□ -1.47
HMGA1P17096 AC073410.1-201ENST00000435125 589 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 OR6D1P-201ENST00000436165 939 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGA1P17096 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGA1P17096 AC026348.1-201ENST00000462549 1053 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGA1P17096 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HMGA1P17096 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGA1P17096 AC021146.10-201ENST00000515628 706 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 RN7SKP248-201ENST00000516278 305 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGA1P17096 AC139697.1-201ENST00000548429 745 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 AC016180.1-201ENST00000567945 403 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGA1P17096 AC012616.1-201ENST00000600294 197 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 NANOGP3-201ENST00000605855 286 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 SDR42E1P1-201ENST00000611327 477 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 AL118522.2-201ENST00000616045 615 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGA1P17096 CASC19-264ENST00000641912 1184 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGA1P17096 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGA1P17096 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.88□□□□□ -1.47
HMGA1P17096 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HMGA1P17096 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HMGA1P17096 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
HMGA1P17096 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HMGA1P17096 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGA1P17096 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGA1P17096 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGA1P17096 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HMGA1P17096 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HMGA1P17096 ZNF101P1-201ENST00000435701 1720 ntBASIC5.88□□□□□ -1.47
HMGA1P17096 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.88□□□□□ -1.47
HMGA1P17096 Z82209.2-201ENST00000623410 2012 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGA1P17096 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGA1P17096 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGA1P17096 ZNF969P-201ENST00000510345 2341 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 AL161912.4-201ENST00000623889 2468 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.87□□□□□ -1.47
HMGA1P17096 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGA1P17096 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.87□□□□□ -1.47
HMGA1P17096 AL034546.1-201ENST00000623740 3693 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 RNA5SP183-201ENST00000362452 119 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HMGA1P17096 MIR1286-201ENST00000408112 78 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 RPL35AP24-201ENST00000413846 330 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 CYCSP12-201ENST00000437729 300 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 MYO5BP2-201ENST00000449815 1277 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 RPS7P6-201ENST00000485777 579 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HMGA1P17096 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.87□□□□□ -1.47
HMGA1P17096 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGA1P17096 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGA1P17096 DHFRP1-201ENST00000579682 559 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 AL513327.3-201ENST00000602618 469 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 AL133481.2-203ENST00000607558 139 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HMGA1P17096 AC004808.2-201ENST00000627965 773 ntBASIC5.87□□□□□ -1.47
HMGA1P17096 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HMGA1P17096 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.87□□□□□ -1.47
HMGA1P17096 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HMGA1P17096 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
HMGA1P17096 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGA1P17096 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HMGA1P17096 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGA1P17096 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGA1P17096 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGA1P17096 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGA1P17096 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGA1P17096 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGA1P17096 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGA1P17096 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.86□□□□□ -1.47
HMGA1P17096 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGA1P17096 MARK2P4-201ENST00000503381 2380 ntBASIC5.86□□□□□ -1.47
HMGA1P17096 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.86□□□□□ -1.47
HMGA1P17096 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.86□□□□□ -1.47
HMGA1P17096 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGA1P17096 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.86□□□□□ -1.47
HMGA1P17096 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HMGA1P17096 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGA1P17096 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HMGA1P17096 AL121977.1-201ENST00000401636 979 ntBASIC5.86□□□□□ -1.47
HMGA1P17096 BRWD1P3-201ENST00000428816 390 ntBASIC5.86□□□□□ -1.47
HMGA1P17096 AL390879.1-201ENST00000439143 386 ntBASIC5.86□□□□□ -1.47
HMGA1P17096 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.86□□□□□ -1.47
HMGA1P17096 RN7SL727P-201ENST00000482164 296 ntBASIC5.86□□□□□ -1.47
HMGA1P17096 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.86□□□□□ -1.47
HMGA1P17096 AC024558.1-201ENST00000505008 528 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms