Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOBP13765 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOBP13765 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOBP13765 RNU4-39P-201ENST00000362455 127 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 SNORD1C-201ENST00000363315 78 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 RPL35AP3-201ENST00000414680 288 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 UBE2V1P6-201ENST00000430840 422 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 USP24P1-201ENST00000433802 779 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 CLNS1AP1-201ENST00000435954 682 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 RPS12P17-201ENST00000438591 377 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 AL390879.1-201ENST00000439143 386 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 RPS7P3-201ENST00000443360 580 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC093166.3-201ENST00000448785 303 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC092905.1-201ENST00000467527 949 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC098847.1-201ENST00000473094 348 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC015908.1-201ENST00000478739 476 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 TRBV5-2-201ENST00000489095 273 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC008629.2-201ENST00000503783 483 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 RN7SKP67-201ENST00000515905 235 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 RN7SKP238-201ENST00000516483 249 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 NPM1P52-201ENST00000518264 846 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 AL845552.1-201ENST00000556820 323 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 AL671309.1-201ENST00000603750 544 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC092266.1-201ENST00000610958 165 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC096708.4-201ENST00000620563 552 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 AL136228.1-201ENST00000622221 319 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 MAPK10-350ENST00000641777 965 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HLA-DOBP13765 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 TTC41P-205ENST00000551270 3963 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 AL592494.2-201ENST00000425455 1548 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC104966.1-201ENST00000467010 1464 ntBASIC5.32□□□□□ -1.56
HLA-DOBP13765 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HLA-DOBP13765 RBPJP7-201ENST00000442803 1447 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 RBPJP5-201ENST00000449433 1447 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 AL513548.1-201ENST00000562904 1724 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOBP13765 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOBP13765 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOBP13765 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOBP13765 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOBP13765 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOBP13765 RNU1-65P-201ENST00000363919 148 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 RNA5SP211-201ENST00000365516 117 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 AL589994.1-201ENST00000404962 340 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 RNA5SP431-201ENST00000410312 120 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC096644.3-201ENST00000416788 338 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC099677.3-201ENST00000427081 395 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOBP13765 MTND2P25-201ENST00000449028 610 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC118758.1-202ENST00000454719 225 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 AL603882.1-201ENST00000463059 681 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC011458.1-201ENST00000604034 617 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 AC009779.8-202ENST00000607990 932 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 PCA3_2.1-201ENST00000612507 409 ntBASIC5.31□□□□□ -1.56
HLA-DOBP13765 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HLA-DOBP13765 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms