Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC131649.2-201ENST00000624925 4439 ntBASIC9.5□□□□□ -0.89
CFTRP13569 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC9.5□□□□□ -0.89
CFTRP13569 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
CFTRP13569 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
CFTRP13569 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC9.5□□□□□ -0.89
CFTRP13569 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CFTRP13569 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CFTRP13569 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC9.49□□□□□ -0.89
CFTRP13569 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFTRP13569 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFTRP13569 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFTRP13569 AL078599.1-201ENST00000402075 293 ntBASIC9.49□□□□□ -0.89
CFTRP13569 RN7SKP126-201ENST00000411143 300 ntBASIC9.49□□□□□ -0.89
CFTRP13569 AL606490.8-201ENST00000441624 319 ntBASIC9.49□□□□□ -0.89
CFTRP13569 GAPDHP25-201ENST00000447061 1001 ntBASIC9.49□□□□□ -0.89
CFTRP13569 AL596266.1-201ENST00000448132 400 ntBASIC9.49□□□□□ -0.89
CFTRP13569 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC9.49□□□□□ -0.89
CFTRP13569 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC9.49□□□□□ -0.89
CFTRP13569 AC209154.1-201ENST00000582156 337 ntBASIC9.49□□□□□ -0.89
CFTRP13569 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC9.49□□□□□ -0.89
CFTRP13569 AC010435.1-201ENST00000623353 1177 ntBASIC9.49□□□□□ -0.89
CFTRP13569 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC9.49□□□□□ -0.89
CFTRP13569 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFTRP13569 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFTRP13569 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFTRP13569 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC9.49□□□□□ -0.89
CFTRP13569 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CFTRP13569 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFTRP13569 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFTRP13569 AP004607.3-201ENST00000530354 3915 ntBASIC9.49□□□□□ -0.89
CFTRP13569 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFTRP13569 AL589993.1-201ENST00000407450 2524 ntBASIC9.48□□□□□ -0.89
CFTRP13569 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CFTRP13569 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CFTRP13569 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CFTRP13569 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CFTRP13569 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
CFTRP13569 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CFTRP13569 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CFTRP13569 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC9.48□□□□□ -0.89
CFTRP13569 RNA5SP91-201ENST00000390902 119 ntBASIC9.48□□□□□ -0.89
CFTRP13569 CHMP1B2P-201ENST00000399581 597 ntBASIC9.48□□□□□ -0.89
CFTRP13569 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC9.48□□□□□ -0.89
CFTRP13569 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC9.48□□□□□ -0.89
CFTRP13569 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC9.48□□□□□ -0.89
CFTRP13569 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC9.48□□□□□ -0.89
CFTRP13569 AC093267.1-201ENST00000489176 961 ntBASIC9.48□□□□□ -0.89
CFTRP13569 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC9.48□□□□□ -0.89
CFTRP13569 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC9.48□□□□□ -0.89
CFTRP13569 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC9.48□□□□□ -0.89
CFTRP13569 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC9.48□□□□□ -0.89
CFTRP13569 MAPK10-365ENST00000641902 3825 ntBASIC9.48□□□□□ -0.89
CFTRP13569 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC9.48□□□□□ -0.89
CFTRP13569 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CFTRP13569 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC9.48□□□□□ -0.89
CFTRP13569 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CFTRP13569 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CFTRP13569 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CFTRP13569 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC9.48□□□□□ -0.89
CFTRP13569 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
CFTRP13569 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
CFTRP13569 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CFTRP13569 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
CFTRP13569 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CFTRP13569 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
CFTRP13569 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CFTRP13569 AC126755.2-208ENST00000327792 462 ntBASIC9.47□□□□□ -0.89
CFTRP13569 AC138969.1-213ENST00000331436 462 ntBASIC9.47□□□□□ -0.89
CFTRP13569 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CFTRP13569 AC007568.1-201ENST00000422912 471 ntBASIC9.47□□□□□ -0.89
CFTRP13569 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC9.47□□□□□ -0.89
CFTRP13569 AC073648.4-201ENST00000442655 781 ntBASIC9.47□□□□□ -0.89
CFTRP13569 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC9.47□□□□□ -0.89
CFTRP13569 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC9.47□□□□□ -0.89
CFTRP13569 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC9.47□□□□□ -0.89
CFTRP13569 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC9.47□□□□□ -0.89
CFTRP13569 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC9.47□□□□□ -0.89
CFTRP13569 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CFTRP13569 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC9.47□□□□□ -0.89
CFTRP13569 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CFTRP13569 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC9.47□□□□□ -0.89
CFTRP13569 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CFTRP13569 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC9.47□□□□□ -0.89
CFTRP13569 API5-210ENST00000534600 1760 ntTSL 5 BASIC9.47□□□□□ -0.89
CFTRP13569 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CFTRP13569 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CFTRP13569 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.47□□□□□ -0.89
CFTRP13569 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC9.47□□□□□ -0.89
CFTRP13569 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CFTRP13569 AC010132.2-201ENST00000295493 1043 ntBASIC9.47□□□□□ -0.89
CFTRP13569 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CFTRP13569 TPT1P13-201ENST00000449760 499 ntBASIC9.47□□□□□ -0.89
CFTRP13569 AC092647.2-201ENST00000452998 253 ntBASIC9.47□□□□□ -0.89
CFTRP13569 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC9.47□□□□□ -0.89
CFTRP13569 DUBR-205ENST00000495228 411 ntTSL 2 BASIC9.47□□□□□ -0.89
CFTRP13569 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
CFTRP13569 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC9.47□□□□□ -0.89
CFTRP13569 AL163952.1-202ENST00000569625 600 ntBASIC9.47□□□□□ -0.89
CFTRP13569 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC9.47□□□□□ -0.89
CFTRP13569 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms