Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.57□□□□□ -1.36
COL6A2P12110 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 QRSL1P2-201ENST00000418582 964 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 SEPT2P1-201ENST00000419651 180 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC6.57□□□□□ -1.36
COL6A2P12110 AC097721.1-201ENST00000427150 1253 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 AL008629.1-201ENST00000438615 184 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.57□□□□□ -1.36
COL6A2P12110 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 MRPL35P2-201ENST00000448009 511 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 AL133217.1-201ENST00000450980 425 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 RPL7AP71-201ENST00000451120 739 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 MRPL35P4-201ENST00000453682 566 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.57□□□□□ -1.36
COL6A2P12110 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 RN7SL492P-201ENST00000460700 295 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC004890.1-201ENST00000461005 181 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 RPL7AP23-201ENST00000482625 776 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC6.57□□□□□ -1.36
COL6A2P12110 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 MRPS33P3-201ENST00000513456 322 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 AC010306.1-201ENST00000523223 1117 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 IGHV1-14-201ENST00000523391 241 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 OR4A2P-201ENST00000527276 913 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 OR5AM1P-201ENST00000532136 1032 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 PDCL3P1-201ENST00000534575 734 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL6A2P12110 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.57□□□□□ -1.36
COL6A2P12110 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.57□□□□□ -1.36
COL6A2P12110 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 PPIAP6-201ENST00000557078 499 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.57□□□□□ -1.36
COL6A2P12110 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 AC069366.1-201ENST00000583159 838 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC6.57□□□□□ -1.36
COL6A2P12110 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.57□□□□□ -1.36
COL6A2P12110 AL157899.1-201ENST00000604110 936 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AL133507.1-201ENST00000605269 557 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.57□□□□□ -1.36
COL6A2P12110 PTCHD3P1-201ENST00000612350 537 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC005277.2-201ENST00000617898 390 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC026585.1-201ENST00000619582 524 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC114546.4-201ENST00000624413 369 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC093909.6-201ENST00000624757 775 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 OR8B1P-202ENST00000641132 1178 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 AC139713.2-210ENST00000641741 992 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.57□□□□□ -1.36
COL6A2P12110 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.57□□□□□ -1.36
COL6A2P12110 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.57□□□□□ -1.36
COL6A2P12110 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.57□□□□□ -1.36
COL6A2P12110 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL6A2P12110 NEPNP-201ENST00000404786 1371 ntBASIC6.57□□□□□ -1.36
COL6A2P12110 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL6A2P12110 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL6A2P12110 ANKRD36P1-201ENST00000344424 659 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 RNA5SP514-201ENST00000363717 111 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.56□□□□□ -1.36
COL6A2P12110 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.56□□□□□ -1.36
COL6A2P12110 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 SNORA70H-201ENST00000383910 135 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 SNORD116-9-201ENST00000384000 95 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 SNORA70J-201ENST00000384182 135 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 SNORD116-3-201ENST00000384287 95 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 SNORD116-7-201ENST00000384404 95 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 SNORD116-5-201ENST00000384462 95 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 RNU1-56P-201ENST00000391303 164 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.56□□□□□ -1.36
COL6A2P12110 PDCL3P5-201ENST00000398028 722 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 SFR1P1-201ENST00000403720 688 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 SOD1P1-201ENST00000407803 440 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 RNA5SP231-201ENST00000410496 138 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 RPL26P37-201ENST00000411983 438 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AL008987.1-201ENST00000415528 237 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.56□□□□□ -1.36
COL6A2P12110 GRPEL2P2-201ENST00000421856 670 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms