Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CHEK2P2-201ENST00000554701 672 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC116158.1-201ENST00000560231 2129 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.38□□□□□ -1.71
CXCL1P09341 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.38□□□□□ -1.71
CXCL1P09341 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.38□□□□□ -1.71
CXCL1P09341 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL1P09341 MIR6726-201ENST00000613751 61 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 MIR6731-201ENST00000614863 72 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC096861.1-201ENST00000616652 240 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.38□□□□□ -1.71
CXCL1P09341 SMG1P7-201ENST00000565246 2704 ntBASIC4.38□□□□□ -1.71
CXCL1P09341 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL1P09341 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL1P09341 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CXCL1P09341 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CXCL1P09341 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CXCL1P09341 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CXCL1P09341 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.38□□□□□ -1.71
CXCL1P09341 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL1P09341 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL1P09341 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL1P09341 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC027088.4-201ENST00000611559 1947 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL1P09341 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.37□□□□□ -1.71
CXCL1P09341 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL1P09341 RN7SKP28-201ENST00000364770 305 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL1P09341 MRPL32P1-201ENST00000406301 247 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.37□□□□□ -1.71
CXCL1P09341 RNA5SP156-201ENST00000410250 110 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 AC096921.1-201ENST00000411661 375 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 OR13Z1P-201ENST00000416141 834 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC099677.3-201ENST00000427081 395 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.37□□□□□ -1.71
CXCL1P09341 AL389925.1-201ENST00000432257 728 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.37□□□□□ -1.71
CXCL1P09341 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.37□□□□□ -1.71
CXCL1P09341 GTF3AP5-201ENST00000442645 697 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 AC097359.1-201ENST00000447946 463 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC009244.1-201ENST00000450566 258 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 NPM1P9-201ENST00000453156 844 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 AL133351.3-201ENST00000454998 193 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL1P09341 GOLGA5P1-201ENST00000507317 980 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.37□□□□□ -1.71
CXCL1P09341 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC084851.2-201ENST00000530377 364 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 AC027369.5-201ENST00000533838 755 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC089984.3-201ENST00000552838 363 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL1P09341 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.37□□□□□ -1.71
CXCL1P09341 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.37□□□□□ -1.71
CXCL1P09341 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL1P09341 AL353807.4-201ENST00000604995 257 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL1P09341 AC022106.2-201ENST00000620114 757 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 AC015871.5-202ENST00000623252 701 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 AC068213.1-201ENST00000625124 226 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
CXCL1P09341 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
CXCL1P09341 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL1P09341 AC007842.1-201ENST00000597336 2039 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CXCL1P09341 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CXCL1P09341 RBMY1HP-201ENST00000382759 1389 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.37□□□□□ -1.71
CXCL1P09341 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CXCL1P09341 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CXCL1P09341 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.37□□□□□ -1.71
CXCL1P09341 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CXCL1P09341 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL1P09341 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL1P09341 AC126323.6-202ENST00000568092 3511 ntBASIC4.37□□□□□ -1.71
CXCL1P09341 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CXCL1P09341 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CXCL1P09341 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.36□□□□□ -1.71
CXCL1P09341 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.36□□□□□ -1.71
CXCL1P09341 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.36□□□□□ -1.71
CXCL1P09341 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CXCL1P09341 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CXCL1P09341 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.36□□□□□ -1.71
CXCL1P09341 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CXCL1P09341 CASC19-246ENST00000641625 1606 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AC007342.5-201ENST00000571340 2142 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 AC004023.1-201ENST00000561473 1744 ntBASIC4.36□□□□□ -1.71
CXCL1P09341 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.36□□□□□ -1.71
CXCL1P09341 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms