Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.39□□□□□ -1.23
COL5A2P05997 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.39□□□□□ -1.23
COL5A2P05997 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC7.39□□□□□ -1.23
COL5A2P05997 MIR4480-201ENST00000582492 71 ntBASIC7.39□□□□□ -1.23
COL5A2P05997 AC005224.3-201ENST00000584683 2140 ntBASIC7.39□□□□□ -1.23
COL5A2P05997 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.39□□□□□ -1.23
COL5A2P05997 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC7.39□□□□□ -1.23
COL5A2P05997 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
COL5A2P05997 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL5A2P05997 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.39□□□□□ -1.23
COL5A2P05997 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
COL5A2P05997 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL5A2P05997 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.39□□□□□ -1.23
COL5A2P05997 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL5A2P05997 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.39□□□□□ -1.23
COL5A2P05997 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC7.39□□□□□ -1.23
COL5A2P05997 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.38□□□□□ -1.23
COL5A2P05997 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 AC012213.2-201ENST00000562917 4597 ntBASIC7.38□□□□□ -1.23
COL5A2P05997 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 MIR551A-201ENST00000385042 96 ntBASIC7.38□□□□□ -1.23
COL5A2P05997 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
COL5A2P05997 AC105233.1-201ENST00000498840 781 ntBASIC7.38□□□□□ -1.23
COL5A2P05997 AC137768.1-201ENST00000549998 553 ntBASIC7.38□□□□□ -1.23
COL5A2P05997 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC7.38□□□□□ -1.23
COL5A2P05997 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.38□□□□□ -1.23
COL5A2P05997 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.38□□□□□ -1.23
COL5A2P05997 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.38□□□□□ -1.23
COL5A2P05997 AC119674.1-217ENST00000641942 1086 ntBASIC7.38□□□□□ -1.23
COL5A2P05997 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
COL5A2P05997 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.38□□□□□ -1.23
COL5A2P05997 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL5A2P05997 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.38□□□□□ -1.23
COL5A2P05997 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.38□□□□□ -1.23
COL5A2P05997 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
COL5A2P05997 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL5A2P05997 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL5A2P05997 MTHFD2P5-201ENST00000320415 844 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 RNVU1-6-201ENST00000364688 164 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 RN7SKP6-201ENST00000364795 319 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 MIR141-201ENST00000384975 95 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 CYB5AP4-201ENST00000396692 399 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 SRSF1P1-201ENST00000424058 520 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 RPL21P133-201ENST00000443666 476 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 AZGP1P2-201ENST00000454506 345 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.37□□□□□ -1.23
COL5A2P05997 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.37□□□□□ -1.23
COL5A2P05997 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC7.37□□□□□ -1.23
COL5A2P05997 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.37□□□□□ -1.23
COL5A2P05997 AC007346.2-201ENST00000564816 892 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC7.37□□□□□ -1.23
COL5A2P05997 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.37□□□□□ -1.23
COL5A2P05997 AC004836.1-201ENST00000623032 634 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
COL5A2P05997 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.37□□□□□ -1.23
COL5A2P05997 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL5A2P05997 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
COL5A2P05997 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
COL5A2P05997 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
COL5A2P05997 DOCK11P1-201ENST00000553480 5932 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL5A2P05997 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL5A2P05997 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL5A2P05997 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL5A2P05997 AL391262.1-201ENST00000556558 1992 ntBASIC7.37□□□□□ -1.23
COL5A2P05997 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.37□□□□□ -1.23
COL5A2P05997 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL5A2P05997 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 AL360081.1-201ENST00000428299 555 ntBASIC7.36□□□□□ -1.23
COL5A2P05997 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.36□□□□□ -1.23
COL5A2P05997 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.36□□□□□ -1.23
COL5A2P05997 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 OR55B1P-203ENST00000641518 2602 ntBASIC7.36□□□□□ -1.23
COL5A2P05997 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL5A2P05997 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL5A2P05997 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7.36□□□□□ -1.23
COL5A2P05997 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL5A2P05997 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.36□□□□□ -1.23
COL5A2P05997 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL5A2P05997 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL5A2P05997 AL162456.1-201ENST00000634535 2006 ntBASIC7.36□□□□□ -1.23
COL5A2P05997 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms