Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC3.39□□□□□ -1.87
APOBP04114 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
APOBP04114 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBP04114 AL121594.2-201ENST00000541658 472 ntBASIC3.39□□□□□ -1.87
APOBP04114 AC092490.3-201ENST00000545370 572 ntBASIC3.39□□□□□ -1.87
APOBP04114 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC3.39□□□□□ -1.87
APOBP04114 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 AC005224.3-201ENST00000584683 2140 ntBASIC3.39□□□□□ -1.87
APOBP04114 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBP04114 SNORA37-201ENST00000384504 129 ntBASIC3.39□□□□□ -1.87
APOBP04114 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 RPL21P129-201ENST00000491732 478 ntBASIC3.39□□□□□ -1.87
APOBP04114 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 AC106730.2-201ENST00000566641 540 ntBASIC3.39□□□□□ -1.87
APOBP04114 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
APOBP04114 AC022819.1-201ENST00000563495 3910 ntBASIC3.39□□□□□ -1.87
APOBP04114 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 AC104581.5-201ENST00000624171 7141 ntBASIC3.39□□□□□ -1.87
APOBP04114 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBP04114 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBP04114 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 AC133552.1-201ENST00000569988 4007 ntBASIC3.38□□□□□ -1.87
APOBP04114 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 AL009179.1-201ENST00000406085 265 ntBASIC3.38□□□□□ -1.87
APOBP04114 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBP04114 AL136455.1-201ENST00000441083 1240 ntBASIC3.38□□□□□ -1.87
APOBP04114 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC3.38□□□□□ -1.87
APOBP04114 AL596266.1-201ENST00000448132 400 ntBASIC3.38□□□□□ -1.87
APOBP04114 RNA5SP392-201ENST00000516905 112 ntBASIC3.38□□□□□ -1.87
APOBP04114 AC018558.5-201ENST00000565840 952 ntBASIC3.38□□□□□ -1.87
APOBP04114 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBP04114 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 CAST-202ENST00000325674 3356 ntTSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 AL353763.1-201ENST00000624467 1628 ntBASIC3.38□□□□□ -1.87
APOBP04114 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
APOBP04114 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 NLRP3P1-201ENST00000622303 1785 ntBASIC3.38□□□□□ -1.87
APOBP04114 AC016745.2-201ENST00000608834 3443 ntBASIC3.38□□□□□ -1.87
APOBP04114 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBP04114 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBP04114 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBP04114 RPL12P28-201ENST00000430852 489 ntBASIC3.38□□□□□ -1.87
APOBP04114 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 RPL5P25-201ENST00000441148 775 ntBASIC3.38□□□□□ -1.87
APOBP04114 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.38□□□□□ -1.87
APOBP04114 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
APOBP04114 AC137695.1-201ENST00000604126 489 ntBASIC3.38□□□□□ -1.87
APOBP04114 AL391358.1-201ENST00000605342 190 ntBASIC3.38□□□□□ -1.87
APOBP04114 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
APOBP04114 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
APOBP04114 AL589993.1-201ENST00000407450 2524 ntBASIC3.38□□□□□ -1.87
APOBP04114 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 U3.22-201ENST00000391120 215 ntBASIC3.38□□□□□ -1.87
APOBP04114 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 ELOCP19-201ENST00000411919 318 ntBASIC3.38□□□□□ -1.87
APOBP04114 AL133482.1-201ENST00000415988 498 ntBASIC3.38□□□□□ -1.87
APOBP04114 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBP04114 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 AC111000.3-201ENST00000508057 576 ntBASIC3.38□□□□□ -1.87
APOBP04114 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBP04114 AL109766.1-201ENST00000555080 552 ntBASIC3.38□□□□□ -1.87
APOBP04114 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBP04114 MIR4675-201ENST00000577898 77 ntBASIC3.38□□□□□ -1.87
APOBP04114 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.38□□□□□ -1.87
APOBP04114 AL359757.1-201ENST00000623176 255 ntBASIC3.38□□□□□ -1.87
APOBP04114 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 AC022893.2-201ENST00000564832 3296 ntBASIC3.38□□□□□ -1.87
APOBP04114 AL080317.3-201ENST00000607434 4315 ntBASIC3.38□□□□□ -1.87
APOBP04114 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC3.38□□□□□ -1.87
APOBP04114 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC3.38□□□□□ -1.87
APOBP04114 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBP04114 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC3.37□□□□□ -1.87
APOBP04114 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms