Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
APOEP02649 PEX12P1-201ENST00000400284 1048 ntBASIC6.11□□□□□ -1.43
APOEP02649 SLC20A1P1-201ENST00000413906 956 ntBASIC6.11□□□□□ -1.43
APOEP02649 IPPKP1-201ENST00000422501 768 ntBASIC6.11□□□□□ -1.43
APOEP02649 CDY8P-201ENST00000428380 1279 ntBASIC6.11□□□□□ -1.43
APOEP02649 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.11□□□□□ -1.43
APOEP02649 AC079807.1-201ENST00000429993 481 ntBASIC6.11□□□□□ -1.43
APOEP02649 DEFA9P-201ENST00000433042 285 ntBASIC6.11□□□□□ -1.43
APOEP02649 KRT8P51-201ENST00000438938 274 ntBASIC6.11□□□□□ -1.43
APOEP02649 AC023141.8-201ENST00000442554 208 ntBASIC6.11□□□□□ -1.43
APOEP02649 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.11□□□□□ -1.43
APOEP02649 CDY20P-201ENST00000447528 1279 ntBASIC6.11□□□□□ -1.43
APOEP02649 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.11□□□□□ -1.43
APOEP02649 RNU1-88P-201ENST00000459274 128 ntBASIC6.11□□□□□ -1.43
APOEP02649 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.11□□□□□ -1.43
APOEP02649 AC090058.1-201ENST00000498788 435 ntBASIC6.11□□□□□ -1.43
APOEP02649 AC090568.1-201ENST00000509499 856 ntBASIC6.11□□□□□ -1.43
APOEP02649 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.11□□□□□ -1.43
APOEP02649 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.11□□□□□ -1.43
APOEP02649 snoU109.5-201ENST00000516231 132 ntBASIC6.11□□□□□ -1.43
APOEP02649 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.11□□□□□ -1.43
APOEP02649 AP000648.1-201ENST00000529682 397 ntBASIC6.11□□□□□ -1.43
APOEP02649 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.11□□□□□ -1.43
APOEP02649 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.11□□□□□ -1.43
APOEP02649 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.11□□□□□ -1.43
APOEP02649 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.11□□□□□ -1.43
APOEP02649 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.11□□□□□ -1.43
APOEP02649 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
APOEP02649 AL031601.1-201ENST00000605702 394 ntBASIC6.11□□□□□ -1.43
APOEP02649 AC015982.1-201ENST00000608113 465 ntBASIC6.11□□□□□ -1.43
APOEP02649 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.11□□□□□ -1.43
APOEP02649 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.11□□□□□ -1.43
APOEP02649 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
APOEP02649 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.11□□□□□ -1.43
APOEP02649 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
APOEP02649 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
APOEP02649 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
APOEP02649 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
APOEP02649 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
APOEP02649 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
APOEP02649 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
APOEP02649 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
APOEP02649 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 AC130304.1-201ENST00000622942 2385 ntBASIC6.1□□□□□ -1.43
APOEP02649 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
APOEP02649 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.1□□□□□ -1.43
APOEP02649 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 AC239868.2-201ENST00000564237 4527 ntBASIC6.1□□□□□ -1.43
APOEP02649 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.1□□□□□ -1.43
APOEP02649 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
APOEP02649 RNU1-150P-201ENST00000362491 162 ntBASIC6.1□□□□□ -1.43
APOEP02649 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.1□□□□□ -1.43
APOEP02649 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 CYCSP51-201ENST00000443545 318 ntBASIC6.1□□□□□ -1.43
APOEP02649 AC084754.1-201ENST00000463466 464 ntBASIC6.1□□□□□ -1.43
APOEP02649 AC011476.1-201ENST00000466725 307 ntBASIC6.1□□□□□ -1.43
APOEP02649 AC093719.1-201ENST00000480427 441 ntBASIC6.1□□□□□ -1.43
APOEP02649 RPL38P3-201ENST00000484463 213 ntBASIC6.1□□□□□ -1.43
APOEP02649 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.1□□□□□ -1.43
APOEP02649 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.1□□□□□ -1.43
APOEP02649 AP004609.2-201ENST00000532177 190 ntBASIC6.1□□□□□ -1.43
APOEP02649 AC079600.1-201ENST00000550326 297 ntBASIC6.1□□□□□ -1.43
APOEP02649 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.1□□□□□ -1.43
APOEP02649 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.1□□□□□ -1.43
APOEP02649 AC007346.2-201ENST00000564816 892 ntBASIC6.1□□□□□ -1.43
APOEP02649 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.1□□□□□ -1.43
APOEP02649 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.1□□□□□ -1.43
APOEP02649 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.1□□□□□ -1.43
APOEP02649 SNX18P12-201ENST00000624821 759 ntBASIC6.1□□□□□ -1.43
APOEP02649 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.1□□□□□ -1.43
APOEP02649 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 OR8G3P-202ENST00000641572 1255 ntBASIC6.1□□□□□ -1.43
APOEP02649 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 AC015689.2-201ENST00000528172 1738 ntBASIC6.1□□□□□ -1.43
APOEP02649 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
APOEP02649 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.1□□□□□ -1.43
APOEP02649 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
APOEP02649 AC006600.2-201ENST00000624834 2506 ntBASIC6.09□□□□□ -1.43
APOEP02649 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.09□□□□□ -1.43
APOEP02649 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
APOEP02649 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.09□□□□□ -1.43
APOEP02649 NEPNP-201ENST00000404786 1371 ntBASIC6.09□□□□□ -1.43
APOEP02649 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.09□□□□□ -1.43
APOEP02649 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
APOEP02649 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
APOEP02649 OR52B3P-201ENST00000314715 928 ntBASIC6.09□□□□□ -1.43
APOEP02649 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
APOEP02649 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.09□□□□□ -1.43
APOEP02649 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
APOEP02649 LYPLA1P3-201ENST00000402650 695 ntBASIC6.09□□□□□ -1.43
APOEP02649 AK4P4-201ENST00000419465 646 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms