Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPTA1P02549 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SPTA1P02549 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPTA1P02549 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SPTA1P02549 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.31□□□□□ -1.56
SPTA1P02549 AC114786.1-201ENST00000512892 1415 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC5.31□□□□□ -1.56
SPTA1P02549 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPTA1P02549 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPTA1P02549 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.31□□□□□ -1.56
SPTA1P02549 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.31□□□□□ -1.56
SPTA1P02549 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SPTA1P02549 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.31□□□□□ -1.56
SPTA1P02549 RPL17P36-201ENST00000420302 549 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.31□□□□□ -1.56
SPTA1P02549 RPL31P44-201ENST00000447680 377 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.31□□□□□ -1.56
SPTA1P02549 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.31□□□□□ -1.56
SPTA1P02549 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.31□□□□□ -1.56
SPTA1P02549 HIRAP1-201ENST00000605318 787 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 AP002799.1-201ENST00000623552 423 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.31□□□□□ -1.56
SPTA1P02549 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SPTA1P02549 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.31□□□□□ -1.56
SPTA1P02549 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPTA1P02549 AC107980.1-201ENST00000558671 3355 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPTA1P02549 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SPTA1P02549 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.31□□□□□ -1.56
SPTA1P02549 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SPTA1P02549 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SPTA1P02549 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SPTA1P02549 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.31□□□□□ -1.56
SPTA1P02549 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SPTA1P02549 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.31□□□□□ -1.56
SPTA1P02549 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.31□□□□□ -1.56
SPTA1P02549 AC044797.1-201ENST00000445744 679 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 SLC25A15P5-201ENST00000508033 253 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 OR1F2P-201ENST00000570470 933 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.31□□□□□ -1.56
SPTA1P02549 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.31□□□□□ -1.56
SPTA1P02549 AC126915.2-201ENST00000610957 190 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 AL139099.4-201ENST00000614802 114 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 SAMMSON-209ENST00000641222 1100 ntBASIC5.31□□□□□ -1.56
SPTA1P02549 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SPTA1P02549 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SPTA1P02549 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SPTA1P02549 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.3□□□□□ -1.56
SPTA1P02549 GUCY1B2-204ENST00000531898 1979 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 AC137056.2-201ENST00000624055 1958 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.3□□□□□ -1.56
SPTA1P02549 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SPTA1P02549 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SPTA1P02549 AL359091.1-201ENST00000449048 1734 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SPTA1P02549 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SPTA1P02549 RN7SKP113-201ENST00000363891 295 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 SNORA11F-201ENST00000408237 128 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.3□□□□□ -1.56
SPTA1P02549 AC022215.1-201ENST00000481770 362 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 RPS21P4-201ENST00000487122 248 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.3□□□□□ -1.56
SPTA1P02549 SNORA43.3-201ENST00000517240 103 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.3□□□□□ -1.56
SPTA1P02549 C1GALT1P3-201ENST00000522049 819 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.3□□□□□ -1.56
SPTA1P02549 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SPTA1P02549 MIR4436B2-201ENST00000581415 91 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 MIR4436B1-201ENST00000583272 91 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.3□□□□□ -1.56
SPTA1P02549 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.3□□□□□ -1.56
SPTA1P02549 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SPTA1P02549 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.3□□□□□ -1.56
SPTA1P02549 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.3□□□□□ -1.56
SPTA1P02549 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.3□□□□□ -1.56
SPTA1P02549 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
SPTA1P02549 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.3□□□□□ -1.56
SPTA1P02549 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.3□□□□□ -1.56
SPTA1P02549 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.3□□□□□ -1.56
SPTA1P02549 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC5.3□□□□□ -1.56
SPTA1P02549 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.3□□□□□ -1.56
SPTA1P02549 AC105235.1-201ENST00000623208 1816 ntBASIC5.3□□□□□ -1.56
SPTA1P02549 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SPTA1P02549 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
SPTA1P02549 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.29□□□□□ -1.56
SPTA1P02549 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 OR2M1P-201ENST00000318104 951 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 SNORA62-201ENST00000365493 153 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 AC019205.1-201ENST00000421830 730 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 AC245028.1-201ENST00000423259 256 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.29□□□□□ -1.56
SPTA1P02549 AC113412.1-201ENST00000425840 504 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.29□□□□□ -1.56
SPTA1P02549 TDGF1P1-201ENST00000445734 527 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 RANP2-201ENST00000456833 229 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.29□□□□□ -1.56
SPTA1P02549 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.29□□□□□ -1.56
SPTA1P02549 HPRT1P1-201ENST00000509498 657 ntBASIC5.29□□□□□ -1.56
SPTA1P02549 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms