Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HLA-DQA1P01909 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 ADAM5-202ENST00000399789 1942 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 RN7SKP78-201ENST00000364711 318 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 SNORD94-201ENST00000386037 137 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AL033519.1-201ENST00000407266 307 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 WDR82P2-201ENST00000444540 928 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AL512593.1-201ENST00000444758 779 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC073909.1-201ENST00000447112 999 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 TAAR4P-201ENST00000454843 1039 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC015524.1-201ENST00000491585 472 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 RPS17P5-201ENST00000498293 408 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 Y_RNA.710-201ENST00000516975 110 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 PPIAP14-201ENST00000577627 496 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 RPL29P33-201ENST00000587474 316 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 U91328.4-201ENST00000608919 517 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC083899.1-201ENST00000454465 3819 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 AC104260.2-201ENST00000623551 3497 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.33□□□□□ -1.72
HLA-DQA1P01909 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQA1P01909 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC025574.1-201ENST00000554784 1653 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 FANCD2P2-201ENST00000437591 1400 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC079097.1-201ENST00000512187 1399 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 ZNF652P1-201ENST00000442420 1309 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC017079.1-201ENST00000333650 415 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 RNU1-84P-201ENST00000365447 164 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 RNA5SP241-201ENST00000391326 114 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 ARSFP1-201ENST00000398758 477 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 RPL12P23-201ENST00000405880 490 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 NACAP7-201ENST00000407371 609 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 SETP15-201ENST00000412724 337 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 GPN3P1-201ENST00000423883 535 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AL020997.1-201ENST00000446554 349 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC104164.1-201ENST00000460282 590 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 MRPS5P3-201ENST00000515577 166 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 MIR2117-201ENST00000516780 80 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AL133399.1-201ENST00000527476 298 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC127381.1-201ENST00000555979 939 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC026956.1-201ENST00000558741 396 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQA1P01909 MRPS21P8-201ENST00000569196 235 ntBASIC4.32□□□□□ -1.72
HLA-DQA1P01909 RN7SL290P-201ENST00000578661 300 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms