Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.19□□□□□ -1.42
MSI1O43347 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.19□□□□□ -1.42
MSI1O43347 TRIM51DP-201ENST00000529746 596 ntBASIC6.19□□□□□ -1.42
MSI1O43347 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.19□□□□□ -1.42
MSI1O43347 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.19□□□□□ -1.42
MSI1O43347 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.19□□□□□ -1.42
MSI1O43347 AC092121.1-201ENST00000569452 202 ntBASIC6.19□□□□□ -1.42
MSI1O43347 MTND4LP25-201ENST00000570218 163 ntBASIC6.19□□□□□ -1.42
MSI1O43347 AC090286.3-201ENST00000573133 187 ntBASIC6.19□□□□□ -1.42
MSI1O43347 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.19□□□□□ -1.42
MSI1O43347 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.19□□□□□ -1.42
MSI1O43347 AC027243.2-201ENST00000602530 724 ntBASIC6.19□□□□□ -1.42
MSI1O43347 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.19□□□□□ -1.42
MSI1O43347 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
MSI1O43347 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 AC083837.1-201ENST00000565297 2994 ntBASIC6.19□□□□□ -1.42
MSI1O43347 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.19□□□□□ -1.42
MSI1O43347 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
MSI1O43347 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
MSI1O43347 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.19□□□□□ -1.42
MSI1O43347 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
MSI1O43347 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.18□□□□□ -1.42
MSI1O43347 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MSI1O43347 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
MSI1O43347 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MSI1O43347 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MSI1O43347 RNU1-150P-201ENST00000362491 162 ntBASIC6.18□□□□□ -1.42
MSI1O43347 RNA5SP211-201ENST00000365516 117 ntBASIC6.18□□□□□ -1.42
MSI1O43347 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MSI1O43347 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
MSI1O43347 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 OR1F12-201ENST00000402365 945 ntBASIC6.18□□□□□ -1.42
MSI1O43347 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.18□□□□□ -1.42
MSI1O43347 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.18□□□□□ -1.42
MSI1O43347 MIR1203-201ENST00000408812 85 ntBASIC6.18□□□□□ -1.42
MSI1O43347 AC099677.3-201ENST00000427081 395 ntBASIC6.18□□□□□ -1.42
MSI1O43347 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 RPS29P14-201ENST00000431518 171 ntBASIC6.18□□□□□ -1.42
MSI1O43347 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 AL162739.1-201ENST00000450606 307 ntBASIC6.18□□□□□ -1.42
MSI1O43347 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 AC093166.4-201ENST00000457867 318 ntBASIC6.18□□□□□ -1.42
MSI1O43347 AL035690.1-201ENST00000490892 383 ntBASIC6.18□□□□□ -1.42
MSI1O43347 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.18□□□□□ -1.42
MSI1O43347 CYP4F27P-201ENST00000514557 494 ntBASIC6.18□□□□□ -1.42
MSI1O43347 AC021146.10-201ENST00000515628 706 ntBASIC6.18□□□□□ -1.42
MSI1O43347 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.18□□□□□ -1.42
MSI1O43347 PCNAP4-201ENST00000532690 730 ntBASIC6.18□□□□□ -1.42
MSI1O43347 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 AC006530.1-201ENST00000555980 571 ntBASIC6.18□□□□□ -1.42
MSI1O43347 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.18□□□□□ -1.42
MSI1O43347 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.18□□□□□ -1.42
MSI1O43347 TXNP4-201ENST00000575018 310 ntBASIC6.18□□□□□ -1.42
MSI1O43347 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 SETP3-201ENST00000581726 813 ntBASIC6.18□□□□□ -1.42
MSI1O43347 NPM1P45-201ENST00000583151 559 ntBASIC6.18□□□□□ -1.42
MSI1O43347 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.18□□□□□ -1.42
MSI1O43347 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.18□□□□□ -1.42
MSI1O43347 AL136131.3-201ENST00000607600 188 ntBASIC6.18□□□□□ -1.42
MSI1O43347 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.18□□□□□ -1.42
MSI1O43347 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.18□□□□□ -1.42
MSI1O43347 AC009032.1-201ENST00000617574 431 ntBASIC6.18□□□□□ -1.42
MSI1O43347 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.18□□□□□ -1.42
MSI1O43347 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.18□□□□□ -1.42
MSI1O43347 OR11H2-202ENST00000641517 1085 ntBASIC6.18□□□□□ -1.42
MSI1O43347 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
MSI1O43347 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.18□□□□□ -1.42
MSI1O43347 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 NCOA4P2-201ENST00000340589 1813 ntBASIC6.18□□□□□ -1.42
MSI1O43347 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
MSI1O43347 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MSI1O43347 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.17□□□□□ -1.42
MSI1O43347 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MSI1O43347 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
MSI1O43347 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
MSI1O43347 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
MSI1O43347 RNA5SP500-201ENST00000364486 119 ntBASIC6.17□□□□□ -1.42
MSI1O43347 RNU6-883P-201ENST00000384597 107 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms