Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RN7SKP107-201ENST00000364157 290 ntBASIC7.39□□□□□ -1.23
SOX1O00570 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX1O00570 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 UBBP1-201ENST00000392399 473 ntBASIC7.39□□□□□ -1.23
SOX1O00570 RN7SKP263-201ENST00000411194 309 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AC098592.2-201ENST00000413158 265 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AL161449.1-201ENST00000414531 1199 ntBASIC7.39□□□□□ -1.23
SOX1O00570 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX1O00570 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX1O00570 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 RAC1P8-201ENST00000427086 527 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AL590128.1-201ENST00000433407 286 ntBASIC7.39□□□□□ -1.23
SOX1O00570 Z83313.1-201ENST00000433780 718 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 PMS2P9-201ENST00000441237 515 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX1O00570 OR51B8P-201ENST00000449892 769 ntBASIC7.39□□□□□ -1.23
SOX1O00570 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 RNU6-956P-201ENST00000458868 103 ntBASIC7.39□□□□□ -1.23
SOX1O00570 RN7SL610P-201ENST00000463845 291 ntBASIC7.39□□□□□ -1.23
SOX1O00570 RPL32P9-201ENST00000487963 407 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AC113430.1-201ENST00000506872 718 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AC079140.3-201ENST00000511111 550 ntBASIC7.39□□□□□ -1.23
SOX1O00570 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.39□□□□□ -1.23
SOX1O00570 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 IGLVI-42-201ENST00000522485 381 ntBASIC7.39□□□□□ -1.23
SOX1O00570 NPIPB14P-203ENST00000532298 987 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC7.39□□□□□ -1.23
SOX1O00570 AP005205.1-201ENST00000563503 508 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 AC096708.2-201ENST00000577676 512 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 AC022146.1-201ENST00000595307 847 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AC068802.1-201ENST00000603420 732 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AC114477.1-201ENST00000605097 605 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC7.39□□□□□ -1.23
SOX1O00570 DLEU2_1.1-201ENST00000612089 120 ntBASIC7.39□□□□□ -1.23
SOX1O00570 DLEU2_1.2-201ENST00000614667 120 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AC105227.2-201ENST00000615075 605 ntBASIC7.39□□□□□ -1.23
SOX1O00570 AC095031.1-201ENST00000623685 672 ntBASIC7.39□□□□□ -1.23
SOX1O00570 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX1O00570 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC7.39□□□□□ -1.23
SOX1O00570 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 MAPK10-285ENST00000641207 2746 ntBASIC7.39□□□□□ -1.23
SOX1O00570 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC7.39□□□□□ -1.23
SOX1O00570 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 HYDIN2-203ENST00000614586 13885 ntBASIC7.39□□□□□ -1.23
SOX1O00570 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.39□□□□□ -1.23
SOX1O00570 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.39□□□□□ -1.23
SOX1O00570 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SOX1O00570 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
SOX1O00570 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SOX1O00570 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SOX1O00570 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.38□□□□□ -1.23
SOX1O00570 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX1O00570 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SOX1O00570 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX1O00570 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX1O00570 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SOX1O00570 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SOX1O00570 AC093225.1-201ENST00000506867 1408 ntBASIC7.38□□□□□ -1.23
SOX1O00570 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.38□□□□□ -1.23
SOX1O00570 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SOX1O00570 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX1O00570 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SOX1O00570 PPIAP24-201ENST00000328558 471 ntBASIC7.38□□□□□ -1.23
SOX1O00570 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
SOX1O00570 RNU1-87P-201ENST00000363727 170 ntBASIC7.38□□□□□ -1.23
SOX1O00570 FAM204BP-201ENST00000369171 701 ntBASIC7.38□□□□□ -1.23
SOX1O00570 Y_RNA.465-201ENST00000384293 102 ntBASIC7.38□□□□□ -1.23
SOX1O00570 RNU6-1055P-201ENST00000391085 107 ntBASIC7.38□□□□□ -1.23
SOX1O00570 SNORA26.8-201ENST00000391306 124 ntBASIC7.38□□□□□ -1.23
SOX1O00570 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SOX1O00570 MTND1P21-201ENST00000412991 285 ntBASIC7.38□□□□□ -1.23
SOX1O00570 OR4K6P-201ENST00000416478 897 ntBASIC7.38□□□□□ -1.23
SOX1O00570 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX1O00570 AC097721.1-201ENST00000427150 1253 ntBASIC7.38□□□□□ -1.23
SOX1O00570 AL139415.2-201ENST00000431968 163 ntBASIC7.38□□□□□ -1.23
SOX1O00570 NDUFS5P5-201ENST00000437256 321 ntBASIC7.38□□□□□ -1.23
SOX1O00570 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX1O00570 AC009263.1-201ENST00000441193 1239 ntBASIC7.38□□□□□ -1.23
SOX1O00570 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
SOX1O00570 SNRPBP1-201ENST00000443634 282 ntBASIC7.38□□□□□ -1.23
SOX1O00570 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.38□□□□□ -1.23
SOX1O00570 AC005297.1-201ENST00000444765 862 ntBASIC7.38□□□□□ -1.23
SOX1O00570 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.38□□□□□ -1.23
SOX1O00570 KRTAP2-5P-201ENST00000446109 396 ntBASIC7.38□□□□□ -1.23
SOX1O00570 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX1O00570 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC7.38□□□□□ -1.23
SOX1O00570 RPL7L1P3-201ENST00000455249 689 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms