Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AC068769.1-201ENST00000474767 2426 ntBASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA2E9PIF3 AL513548.1-201ENST00000562904 1724 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 NAMPTP1-201ENST00000440465 2514 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 SNORA70.9-201ENST00000384370 135 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AL096800.1-201ENST00000405326 893 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 RN7SKP206-201ENST00000410823 293 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AL035660.1-201ENST00000422041 222 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 BX323845.3-201ENST00000428215 527 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 MTND6P12-201ENST00000428247 522 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 PCBP2P1-201ENST00000437262 977 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AP006222.1-205ENST00000450734 457 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 NXT1P1-201ENST00000458481 316 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 RN7SL174P-201ENST00000475578 289 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC083795.1-201ENST00000491760 320 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 RN7SL101P-201ENST00000496350 279 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC106872.4-201ENST00000510050 523 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC079600.1-201ENST00000550326 297 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 NPM1P5-201ENST00000557228 838 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 MIR4776-2-201ENST00000580204 80 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC027334.1-201ENST00000603257 310 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 MIR6809-201ENST00000612189 116 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC096861.1-201ENST00000616652 240 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC018659.2-201ENST00000624690 715 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 RBPJP7-201ENST00000442803 1447 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 RBPJP5-201ENST00000449433 1447 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 GNL2P1-201ENST00000451274 2190 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 AC123769.1-201ENST00000530992 3192 ntBASIC5.45□□□□□ -1.54
NPIPA2E9PIF3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 MTHFD2P5-201ENST00000320415 844 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 RNU105B-201ENST00000364478 208 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC005522.1-201ENST00000395416 346 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC007068.1-201ENST00000396690 844 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AL096711.1-201ENST00000404780 554 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AL512422.1-201ENST00000407033 553 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 MIR1203-201ENST00000408812 85 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 RNA5SP178-201ENST00000410380 128 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AL354890.1-201ENST00000413730 346 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 EEF1B2P8-201ENST00000414101 671 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 RPS15AP30-201ENST00000420976 390 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 BX284632.2-201ENST00000421091 399 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 FTLP19-201ENST00000433300 394 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 VN1R110P-201ENST00000438988 971 ntBASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.44□□□□□ -1.54
NPIPA2E9PIF3 AL512605.1-202ENST00000441919 381 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms