Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 TMSB4XP4-201ENST00000323496 618 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 OR10R3P-201ENST00000361688 942 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RN7SKP69-201ENST00000365390 305 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RN7SKP81-201ENST00000365603 331 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 SNORA17A-201ENST00000391185 133 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 METTL15P3-201ENST00000415522 1221 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RPL5P2-201ENST00000429598 854 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AK3P5-201ENST00000432033 519 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 NDUFS5P5-201ENST00000437256 321 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL391987.1-201ENST00000441025 200 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RSU1P1-201ENST00000453416 441 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC011476.1-201ENST00000466725 307 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC011411.1-201ENST00000509592 876 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC112191.2-201ENST00000522428 333 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 PCNAP4-201ENST00000532690 730 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL163952.1-202ENST00000569625 600 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC011445.2-201ENST00000599274 173 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 SNORA17.5-201ENST00000630429 132 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 BCORP1-203ENST00000513194 5093 ntBASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TCRBV4S1A1TA0A5B7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 MIR1203-201ENST00000408812 85 ntBASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 BX284632.2-201ENST00000421091 399 ntBASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 VN1R110P-201ENST00000438988 971 ntBASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL512605.1-202ENST00000441919 381 ntBASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL359955.2-201ENST00000445380 353 ntBASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 uc_338.26-201ENST00000612659 160 ntBASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL021918.2-201ENST00000613415 194 ntBASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC063952.1-203ENST00000634410 658 ntBASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC103703.1-201ENST00000634783 663 ntBASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 OR8G3P-202ENST00000641572 1255 ntBASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TCRBV4S1A1TA0A5B7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 CASC19-260ENST00000641828 2001 ntBASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC016745.2-201ENST00000608834 3443 ntBASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 SAMM50P1-201ENST00000455403 1399 ntBASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AC027088.4-201ENST00000611559 1947 ntBASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 U3.10-201ENST00000364459 214 ntBASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TCRBV4S1A1TA0A5B7 RPL11P3-201ENST00000395256 523 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms