Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 HMGB3P19-201ENST00000403971 560 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 RPS29P14-201ENST00000431518 171 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 RPL7P61-201ENST00000451721 751 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 RPS3AP6-201ENST00000484430 795 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC106800.3-201ENST00000511389 308 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC021451.1-201ENST00000523498 1129 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC073916.1-201ENST00000545095 130 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 RPL3P13-201ENST00000550415 216 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AGGF1P9-201ENST00000561884 913 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC007448.1-201ENST00000582714 234 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 SYPL1P2-201ENST00000582878 727 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC005034.4-201ENST00000603612 899 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC124916.2-201ENST00000604416 224 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC112503.1-201ENST00000608436 391 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AC140725.3-201ENST00000616193 880 ntBASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.4□□□□□ -1.38
PCDHB1Q9Y5F3 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.4□□□□□ -1.39
PCDHB1Q9Y5F3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
PCDHB1Q9Y5F3 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHB1Q9Y5F3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHB1Q9Y5F3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.4□□□□□ -1.39
PCDHB1Q9Y5F3 Z93929.1-201ENST00000418200 1475 ntBASIC6.4□□□□□ -1.39
PCDHB1Q9Y5F3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
PCDHB1Q9Y5F3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 RNU6-354P-201ENST00000383862 107 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 RNU6-610P-201ENST00000384264 107 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 OR51A6P-201ENST00000418680 1004 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC241520.1-201ENST00000422654 1099 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC006994.1-201ENST00000438212 839 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AMYP1-201ENST00000440059 1023 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 MTCYBP21-201ENST00000443300 1113 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 SYT14P1-201ENST00000481459 721 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 OR5H3P-201ENST00000502817 919 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC008427.1-201ENST00000503102 655 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC069306.1-201ENST00000507006 843 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AP005639.1-201ENST00000526939 192 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC011492.1-201ENST00000600023 315 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC069431.2-201ENST00000604149 1099 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC009948.4-201ENST00000604692 675 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AL136097.3-201ENST00000611097 505 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AL669942.2-201ENST00000620352 697 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC125238.2-201ENST00000430003 1440 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AC005702.3-201ENST00000585345 1447 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 AL078595.2-201ENST00000605309 1780 ntBASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.39□□□□□ -1.39
PCDHB1Q9Y5F3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.38□□□□□ -1.39
PCDHB1Q9Y5F3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms