Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 AC024651.2-201ENST00000562480 2098 ntBASIC7.2□□□□□ -1.26
CTDP1Q9Y5B0 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 MTCO1P4-201ENST00000520516 1409 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC018717.1-201ENST00000457712 1505 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 MIR7-1-201ENST00000384871 110 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 RNU6-564P-201ENST00000410983 104 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 MTATP6P26-201ENST00000445926 662 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC018638.3-201ENST00000461273 132 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 TRAV31-201ENST00000502780 342 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC105420.1-201ENST00000504389 582 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 CR383658.1-201ENST00000514609 734 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC092865.1-201ENST00000544395 1023 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC234775.3-201ENST00000564612 656 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 RN7SL339P-201ENST00000580597 296 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC005776.1-201ENST00000603164 290 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AL583832.1-201ENST00000603227 784 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC024884.1-201ENST00000620583 399 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC068057.2-201ENST00000624047 895 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 AC009039.2-201ENST00000624524 529 ntBASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.19□□□□□ -1.26
CTDP1Q9Y5B0 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 RNA5SP110-201ENST00000362638 115 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 SUGT1P2-201ENST00000379452 992 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 STAT4-203ENST00000409995 709 ntTSL 5 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 RNU6-584P-201ENST00000410350 95 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 OR13Z1P-201ENST00000416141 834 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 BMS1P13-201ENST00000417301 885 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC066692.1-201ENST00000421721 457 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC114973.1-201ENST00000429057 632 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC023141.6-201ENST00000429418 337 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 TPTE2P3-201ENST00000441562 1189 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AL161722.1-201ENST00000446972 1032 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 MTATP6P14-201ENST00000455189 673 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 SNX18P26-201ENST00000458433 740 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC006499.4-201ENST00000510947 694 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AP000662.1-201ENST00000530952 487 ntBASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CTDP1Q9Y5B0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms