Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 NMD3P2-201ENST00000421815 761 ntBASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 BX276092.6-201ENST00000430476 250 ntBASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AL353662.1-201ENST00000439099 327 ntBASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 BX276092.8-201ENST00000455722 250 ntBASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 RN7SKP288-201ENST00000516227 268 ntBASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AC090826.1-203ENST00000569235 490 ntBASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AC073389.3-201ENST00000609434 935 ntBASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AL353796.1-201ENST00000561542 3241 ntBASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 HSPD1P7-201ENST00000447985 1686 ntBASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 AC005005.4-201ENST00000623789 16698 ntBASIC5.15□□□□□ -1.59
RHBDD3Q9Y3P4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 LYARP1-201ENST00000436977 1501 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 RNA5SP211-201ENST00000365516 117 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 RBBP4P5-201ENST00000398583 1266 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 GCNT1P4-201ENST00000404096 329 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 SNRPEP6-201ENST00000407465 277 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 RN7SKP86-201ENST00000410454 332 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AL354868.1-201ENST00000417077 482 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 RPSAP65-201ENST00000429660 595 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 TRIM60P16-201ENST00000444048 694 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 RPL12P39-201ENST00000455456 496 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 RPL38P3-201ENST00000484463 213 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 PDCL3P4-201ENST00000489621 720 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AL358913.1-201ENST00000554342 121 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 OR1E3-201ENST00000575608 948 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AL713998.2-201ENST00000604538 1198 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 FAM27E2-201ENST00000619668 403 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC111152.1-202ENST00000635848 339 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC027279.1-201ENST00000568885 4284 ntBASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.14□□□□□ -1.59
RHBDD3Q9Y3P4 AC093671.1-201ENST00000624981 2929 ntBASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RHBDD3Q9Y3P4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms