Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 DNM1P47-203ENST00000571780 12667 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 AL078595.2-201ENST00000605309 1780 ntBASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CLIP2Q9UDT6 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 AC140134.1-201ENST00000511830 3544 ntBASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 AL512422.1-201ENST00000407033 553 ntBASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 RN7SKP206-201ENST00000410823 293 ntBASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 RPS4XP5-201ENST00000419038 768 ntBASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 AC099677.3-201ENST00000427081 395 ntBASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 NXT1P1-201ENST00000458481 316 ntBASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 RN7SL101P-201ENST00000496350 279 ntBASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 OR7E158P-201ENST00000524483 910 ntBASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 NPM1P42-201ENST00000560329 862 ntBASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
CLIP2Q9UDT6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 AC025470.1-201ENST00000510053 2032 ntBASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 OR7E101P-201ENST00000400428 513 ntBASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 RPS3AP2-201ENST00000407190 754 ntBASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 OR5W1P-201ENST00000423705 938 ntBASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 BX119321.1-201ENST00000428912 797 ntBASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 HMGN1P36-201ENST00000446623 298 ntBASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 CYP4F27P-201ENST00000514557 494 ntBASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 IGLV3-30-201ENST00000524362 298 ntBASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 MIR132-201ENST00000591554 101 ntBASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 AC126175.1-201ENST00000617041 758 ntBASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CLIP2Q9UDT6 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 SNORD1C-201ENST00000363315 78 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AC087752.1-201ENST00000391360 558 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 RN7SKP29-201ENST00000410957 272 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 MYL6P5-201ENST00000412707 459 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 MRPL53P1-201ENST00000414323 319 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AC017078.1-201ENST00000416146 368 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 USP24P1-201ENST00000433802 779 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AC018638.3-201ENST00000461273 132 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 RN7SL273P-201ENST00000481561 299 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 GAPDHP71-201ENST00000511530 1003 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AC027544.3-201ENST00000535082 757 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AP001357.1-201ENST00000586304 1053 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AC145423.1-201ENST00000605712 336 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 MIR4302-201ENST00000638058 60 ntBASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 OR11H2-202ENST00000641517 1085 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms