Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AL359922.2-201ENST00000581788 3017 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 MT-RNR2-201ENST00000387347 1559 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 RN7SKP95-201ENST00000362860 303 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 RPL34P20-201ENST00000442771 351 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 MRPS33P2-201ENST00000507850 322 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 TOMM22P4-201ENST00000511318 336 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AP000919.1-201ENST00000582850 985 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AC009597.2-201ENST00000604659 592 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 NANOGP3-201ENST00000605855 286 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AL078621.3-201ENST00000623707 2042 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AL031123.3-201ENST00000623345 1837 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 RNU1-24P-201ENST00000364285 165 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 GSTM5P1-201ENST00000434751 660 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AL596266.1-201ENST00000448132 400 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AC103987.1-201ENST00000473394 348 ntBASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC5.73□□□□□ -1.49
CHD7Q9P2D1 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 TRGV7-201ENST00000427089 353 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 RPL5P25-201ENST00000441148 775 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AC097484.1-201ENST00000471148 389 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AC007346.2-201ENST00000564816 892 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AL512782.1-201ENST00000603093 364 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AP001521.2-201ENST00000608772 546 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AC131649.2-201ENST00000624925 4439 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AC016251.2-201ENST00000623393 3089 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 RNA5SP515-201ENST00000364570 118 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 RN7SKP21-201ENST00000516503 220 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AC005000.1-201ENST00000536192 288 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AP005403.1-201ENST00000579720 229 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 PABPC1P8-201ENST00000452851 2086 ntBASIC5.72□□□□□ -1.49
CHD7Q9P2D1 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CHD7Q9P2D1 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms