Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AL121886.1-201ENST00000358609 435 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 MIR551B-201ENST00000384984 96 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 MIR130B-202ENST00000385018 82 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 RN7SKP29-201ENST00000410957 272 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AL133482.1-201ENST00000415988 498 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 THEM7P-201ENST00000419556 672 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 LINC02210-201ENST00000444561 288 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AC005077.1-201ENST00000449226 375 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 RN7SL254P-201ENST00000460609 284 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 RPS27P20-201ENST00000492051 246 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 RN7SL362P-201ENST00000494228 267 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AC105420.1-201ENST00000504389 582 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 LDHBP3-201ENST00000514909 822 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AC139365.2-201ENST00000517972 253 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AC096996.1-201ENST00000563813 325 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AC005244.1-201ENST00000582566 339 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AC010487.1-201ENST00000594408 1172 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VAPAQ9P0L0 AL138693.1-201ENST00000622219 129 ntBASIC5.4□□□□□ -1.54
VAPAQ9P0L0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 AP001029.2-203ENST00000589795 4910 ntBASIC5.4□□□□□ -1.55
VAPAQ9P0L0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VAPAQ9P0L0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC068870.3-201ENST00000625077 2536 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC020633.1-201ENST00000468439 2247 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 SNORA51.9-201ENST00000384295 124 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AL357752.1-201ENST00000412817 349 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 RPS19P6-201ENST00000441327 433 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC097463.1-201ENST00000447288 481 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 HMGB1P7-201ENST00000450921 612 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 RPS23P2-201ENST00000463671 415 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC099521.1-201ENST00000482557 334 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 SNORA70.11-201ENST00000515987 138 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 RNU2-45P-201ENST00000516068 187 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 SNORA70.13-201ENST00000516116 138 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 RN7SKP35-201ENST00000517210 151 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 SEPT10P1-201ENST00000517342 1162 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 IGKV3D-25-201ENST00000519599 235 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC116917.1-201ENST00000520558 305 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 OR4A17P-201ENST00000526032 904 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 uc_338.31-201ENST00000615595 186 ntBASIC5.39□□□□□ -1.55
VAPAQ9P0L0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.39□□□□□ -1.55
VAPAQ9P0L0 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms