Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
TREX1Q9NSU2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.71□□□□□ -1.49
TREX1Q9NSU2 AL161912.4-201ENST00000623889 2468 ntBASIC5.71□□□□□ -1.49
TREX1Q9NSU2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TREX1Q9NSU2 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC099654.3-201ENST00000447087 1546 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 RN7SKP187-201ENST00000365536 330 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC005042.1-201ENST00000393397 800 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC096921.1-201ENST00000411661 375 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AL354868.1-201ENST00000417077 482 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AK4P4-201ENST00000419465 646 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 NENFP1-201ENST00000419476 466 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AL035660.1-201ENST00000422041 222 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 OR5W1P-201ENST00000423705 938 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 BX276092.6-201ENST00000430476 250 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 BX276092.8-201ENST00000455722 250 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 SNORD125-201ENST00000459538 96 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 RPL32P33-201ENST00000487023 394 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 RPS26P24-201ENST00000497656 331 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 SCARNA6.1-201ENST00000516989 238 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC021678.3-201ENST00000517893 476 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC060775.1-201ENST00000518241 520 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 HSPE1P2-201ENST00000554777 306 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC107958.1-201ENST00000556576 290 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AGGF1P7-201ENST00000562369 913 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC016839.1-201ENST00000578162 867 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 COX6CP7-201ENST00000597056 208 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 FAM27E4-201ENST00000605259 342 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AL353729.2-201ENST00000605859 1249 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC129778.1-202ENST00000623812 261 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AL591379.1-207ENST00000635982 261 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC099654.11-201ENST00000638857 294 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AC087516.1-201ENST00000561236 2428 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 HSPD1P7-201ENST00000447985 1686 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.71□□□□□ -1.5
TREX1Q9NSU2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TREX1Q9NSU2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 RNA5SP326-201ENST00000363209 110 ntBASIC5.7□□□□□ -1.5
TREX1Q9NSU2 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 OR7E101P-201ENST00000400428 513 ntBASIC5.7□□□□□ -1.5
TREX1Q9NSU2 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 DPPA2P2-201ENST00000418220 897 ntBASIC5.7□□□□□ -1.5
TREX1Q9NSU2 RNF10P1-201ENST00000418589 369 ntBASIC5.7□□□□□ -1.5
TREX1Q9NSU2 AC066692.1-201ENST00000421721 457 ntBASIC5.7□□□□□ -1.5
TREX1Q9NSU2 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 AL512637.1-201ENST00000439523 1231 ntBASIC5.7□□□□□ -1.5
TREX1Q9NSU2 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 GLUD1P3-202ENST00000508551 200 ntBASIC5.7□□□□□ -1.5
TREX1Q9NSU2 AC114781.3-201ENST00000512083 142 ntBASIC5.7□□□□□ -1.5
TREX1Q9NSU2 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 TRIM77BP-201ENST00000524985 1119 ntBASIC5.7□□□□□ -1.5
TREX1Q9NSU2 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.7□□□□□ -1.5
TREX1Q9NSU2 AC063977.5-201ENST00000601044 974 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms