Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 AL592494.2-201ENST00000425455 1548 ntBASIC6.3□□□□□ -1.4
USP29Q9HBJ7 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP29Q9HBJ7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC024651.2-201ENST00000562480 2098 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC022164.1-201ENST00000568767 2673 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 COX6B1P3-201ENST00000312310 260 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 SNORA77.2-201ENST00000408571 112 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC110602.1-201ENST00000437414 318 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC010240.2-201ENST00000445363 1205 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 RPL23AP60-201ENST00000450011 454 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 PRMT5P1-201ENST00000514351 598 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 TPM3P3-201ENST00000521343 354 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AP003102.1-201ENST00000525638 661 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 OR4A42P-201ENST00000531397 938 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 FAM60CP-201ENST00000591086 664 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC073111.2-201ENST00000605657 1075 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 NCOA4P2-201ENST00000340589 1813 ntBASIC6.29□□□□□ -1.4
USP29Q9HBJ7 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP29Q9HBJ7 AC079753.1-201ENST00000623243 3868 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 EIF3EP1-201ENST00000433978 1316 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 RNU11-201ENST00000387069 134 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AC004386.1-201ENST00000393214 761 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 REG1CP-206ENST00000447469 496 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 MTND6P32-201ENST00000457611 483 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 TRBV8-1-201ENST00000481590 279 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AC095052.1-201ENST00000509955 863 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.28□□□□□ -1.4
USP29Q9HBJ7 RN7SL753P-201ENST00000581238 290 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AL360012.1-201ENST00000602813 131 ntBASIC6.28□□□□□ -1.4
USP29Q9HBJ7 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms