Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 AP001922.4-201ENST00000526967 290 ntBASIC8.61□□□□□ -1.03
SCAPERQ9BY12 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 AC126615.2-201ENST00000553003 515 ntBASIC8.61□□□□□ -1.03
SCAPERQ9BY12 BLZF2P-201ENST00000553776 1130 ntBASIC8.61□□□□□ -1.03
SCAPERQ9BY12 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 AL355974.3-201ENST00000617383 467 ntBASIC8.61□□□□□ -1.03
SCAPERQ9BY12 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 LINC01739-205ENST00000641890 573 ntBASIC8.61□□□□□ -1.03
SCAPERQ9BY12 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC8.61□□□□□ -1.03
SCAPERQ9BY12 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 AC119674.1-213ENST00000641177 1386 ntBASIC8.6□□□□□ -1.03
SCAPERQ9BY12 AC008957.3-201ENST00000624112 2242 ntBASIC8.6□□□□□ -1.03
SCAPERQ9BY12 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 MIR130A-201ENST00000385274 89 ntBASIC8.6□□□□□ -1.03
SCAPERQ9BY12 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 CLMN-206ENST00000556441 452 ntTSL 5 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 AC011840.5-201ENST00000582125 771 ntBASIC8.6□□□□□ -1.03
SCAPERQ9BY12 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 AC130304.1-201ENST00000622942 2385 ntBASIC8.6□□□□□ -1.03
SCAPERQ9BY12 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SCAPERQ9BY12 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 ZNF658B-201ENST00000602828 3408 ntBASIC8.59□□□□□ -1.03
SCAPERQ9BY12 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 MIR133B-201ENST00000362210 119 ntBASIC8.59□□□□□ -1.03
SCAPERQ9BY12 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 FAR2P2-201ENST00000413041 594 ntBASIC8.59□□□□□ -1.03
SCAPERQ9BY12 FAR2P4-202ENST00000425399 584 ntBASIC8.59□□□□□ -1.03
SCAPERQ9BY12 CT45A11P-201ENST00000448043 1134 ntBASIC8.59□□□□□ -1.03
SCAPERQ9BY12 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 MIR2117-201ENST00000516780 80 ntBASIC8.59□□□□□ -1.03
SCAPERQ9BY12 MAL2-207ENST00000522828 603 ntTSL 3 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 GSTP1P1-201ENST00000548078 319 ntBASIC8.59□□□□□ -1.03
SCAPERQ9BY12 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 AC091193.1-201ENST00000604640 448 ntBASIC8.59□□□□□ -1.03
SCAPERQ9BY12 FAM25E-202ENST00000608562 189 ntBASIC8.59□□□□□ -1.03
SCAPERQ9BY12 AC073342.2-201ENST00000595842 1800 ntBASIC8.59□□□□□ -1.03
SCAPERQ9BY12 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC8.59□□□□□ -1.03
SCAPERQ9BY12 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
SCAPERQ9BY12 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 AC110716.2-201ENST00000563865 3945 ntBASIC8.58□□□□□ -1.04
SCAPERQ9BY12 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 MRRF-207ENST00000373729 870 ntTSL 3 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 AL353626.3-201ENST00000413399 657 ntBASIC8.58□□□□□ -1.04
SCAPERQ9BY12 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 DNAJB5P1-201ENST00000454004 806 ntBASIC8.58□□□□□ -1.04
SCAPERQ9BY12 AC007686.1-201ENST00000488511 463 ntBASIC8.58□□□□□ -1.04
SCAPERQ9BY12 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 PACRG-210ENST00000611387 279 ntTSL 5 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 AP002799.1-201ENST00000623552 423 ntBASIC8.58□□□□□ -1.04
SCAPERQ9BY12 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 HSPA8P18-201ENST00000439846 1928 ntBASIC8.58□□□□□ -1.04
SCAPERQ9BY12 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
SCAPERQ9BY12 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SCAPERQ9BY12 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms