Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC006115.2-201ENST00000596823 202 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 AL499605.1-201ENST00000604628 403 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 BX323046.1-201ENST00000610145 535 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 AL136228.1-201ENST00000622221 319 ntBASIC5.51□□□□□ -1.53
COL21A1Q96P44 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL21A1Q96P44 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL21A1Q96P44 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL21A1Q96P44 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL21A1Q96P44 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL21A1Q96P44 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC016745.2-201ENST00000608834 3443 ntBASIC5.5□□□□□ -1.53
COL21A1Q96P44 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL21A1Q96P44 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL21A1Q96P44 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL21A1Q96P44 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 RPL35AP3-201ENST00000414680 288 ntBASIC5.5□□□□□ -1.53
COL21A1Q96P44 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 TUBB4BP6-201ENST00000437576 479 ntBASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 SCARNA18.1-201ENST00000516330 83 ntBASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 WBP1LP3-201ENST00000523033 208 ntBASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC027369.2-201ENST00000528030 440 ntBASIC5.5□□□□□ -1.53
COL21A1Q96P44 OR4A42P-201ENST00000531397 938 ntBASIC5.5□□□□□ -1.53
COL21A1Q96P44 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AL136131.3-201ENST00000607600 188 ntBASIC5.5□□□□□ -1.53
COL21A1Q96P44 AL021918.2-201ENST00000613415 194 ntBASIC5.5□□□□□ -1.53
COL21A1Q96P44 AL445670.1-201ENST00000618889 801 ntBASIC5.5□□□□□ -1.53
COL21A1Q96P44 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL21A1Q96P44 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.5□□□□□ -1.53
COL21A1Q96P44 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL21A1Q96P44 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 RNFT1P3-201ENST00000340898 1052 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL21A1Q96P44 RN7SKP275-201ENST00000364626 301 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 MIR323B-201ENST00000385269 82 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 OR7E156P-201ENST00000400303 464 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 GAPDHP75-201ENST00000433910 943 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 AL138899.2-201ENST00000439139 499 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 RPS7P3-201ENST00000443360 580 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 BMS1P10-201ENST00000443754 1120 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 CST12P-201ENST00000457644 362 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 RN7SL269P-201ENST00000467795 305 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 PFN1P8-201ENST00000497012 543 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 GLUD1P3-202ENST00000508551 200 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
COL21A1Q96P44 AC026782.2-201ENST00000510845 636 ntBASIC5.49□□□□□ -1.53
COL21A1Q96P44 SETP21-201ENST00000514799 892 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms