Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL078595.3-201ENST00000623815 1166 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AC079298.2-201ENST00000623885 459 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC4Q92889 CU459211.1-201ENST00000635667 749 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
ERCC4Q92889 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
ERCC4Q92889 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
ERCC4Q92889 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC7.05□□□□□ -1.28
ERCC4Q92889 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC4Q92889 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC4Q92889 MTCO1P15-201ENST00000529569 1526 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AC092692.1-201ENST00000623625 2595 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 AL133243.2-201ENST00000610331 1621 ntBASIC7.05□□□□□ -1.28
ERCC4Q92889 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
ERCC4Q92889 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 ZNF101P1-201ENST00000435701 1720 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC4Q92889 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
ERCC4Q92889 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
ERCC4Q92889 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ERCC4Q92889 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 RNU4-40P-201ENST00000364351 143 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 MIR421-201ENST00000365696 85 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 ANAPC10P1-201ENST00000395991 556 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 AC026310.1-201ENST00000396004 378 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC4Q92889 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC4Q92889 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 BX679664.2-201ENST00000439282 283 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC4Q92889 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.04□□□□□ -1.28
ERCC4Q92889 AC063955.1-201ENST00000462872 685 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 SNRPCP3-201ENST00000474888 476 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC4Q92889 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC4Q92889 RNA5SP418-201ENST00000515951 117 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
ERCC4Q92889 NPM1P52-201ENST00000518264 846 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC7.04□□□□□ -1.28
ERCC4Q92889 EEF1A1P37-201ENST00000522748 715 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 UBTFL9-201ENST00000534504 1148 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 OSBPL9P3-201ENST00000534523 595 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC4Q92889 AC092865.1-201ENST00000544395 1023 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 HNRNPCP1-201ENST00000556181 766 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 AC233266.2-201ENST00000567067 528 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.04□□□□□ -1.28
ERCC4Q92889 RNU4ATAC-201ENST00000580972 127 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC4Q92889 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
ERCC4Q92889 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.04□□□□□ -1.28
ERCC4Q92889 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 MIR8084-201ENST00000614105 89 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 AL162377.2-201ENST00000624532 337 ntBASIC7.04□□□□□ -1.28
ERCC4Q92889 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
ERCC4Q92889 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.04□□□□□ -1.28
ERCC4Q92889 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
ERCC4Q92889 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC4Q92889 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC4Q92889 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC4Q92889 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC4Q92889 RNU1-59P-201ENST00000364829 162 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
ERCC4Q92889 NPM1P38-201ENST00000403835 865 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 SETP8-201ENST00000435341 628 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 PSMD8P1-201ENST00000436275 769 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC4Q92889 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC4Q92889 Z99127.2-201ENST00000441426 334 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 OR13K1P-201ENST00000444577 975 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC4Q92889 PPIAP32-201ENST00000449940 472 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 MTND2P8-201ENST00000450555 1025 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC4Q92889 AC104982.1-201ENST00000478775 574 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC4Q92889 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms