Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 OTX2P1-201ENST00000450956 354 ntBASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 RN7SL610P-201ENST00000463845 291 ntBASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 RPL12P48-201ENST00000605620 304 ntBASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 AF117829.2-201ENST00000619538 361 ntBASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 OR8G3P-202ENST00000641572 1255 ntBASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.94□□□□□ -1.46
SHROOM3Q8TF72 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AC016739.1-201ENST00000405359 345 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 KRT8P51-201ENST00000438938 274 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 EEF1B2P6-201ENST00000445713 673 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AC091685.2-201ENST00000454924 864 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 OR5H7P-201ENST00000514084 930 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 RN7SKP67-201ENST00000515905 235 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 HAUS8P1-201ENST00000549005 542 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 RN7SL544P-201ENST00000617232 284 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 RN7SL763P-201ENST00000620922 284 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AP002833.3-201ENST00000625075 2265 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 RNA5SP326-201ENST00000363209 110 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AK4P4-201ENST00000419465 646 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 RBPJP7-201ENST00000442803 1447 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 RBPJP5-201ENST00000449433 1447 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 SIAH1P1-201ENST00000479411 923 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AL158068.1-201ENST00000506116 616 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AC105384.2-201ENST00000508433 640 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AL136131.3-201ENST00000607600 188 ntBASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.93□□□□□ -1.46
SHROOM3Q8TF72 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 AC106872.5-201ENST00000508856 1416 ntBASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 NEPNP-201ENST00000404786 1371 ntBASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 RNU4-34P-201ENST00000410431 124 ntBASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 AC006455.6-201ENST00000426192 893 ntBASIC5.92□□□□□ -1.46
SHROOM3Q8TF72 SEPT14P12-201ENST00000442280 560 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms