Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
SMC1BQ8NDV3 AC026951.1-201ENST00000559530 2459 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 SNORA64.1-201ENST00000362600 132 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 RNU6-609P-201ENST00000365459 107 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AL353625.1-202ENST00000366273 571 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AL035405.1-201ENST00000400795 710 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 RPS21P8-201ENST00000413365 247 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 BMS1P17-202ENST00000416720 316 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 RPS7P8-201ENST00000418311 581 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 RPL35AP31-201ENST00000418340 337 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC008753.1-201ENST00000423096 284 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 RNF19BPX-201ENST00000426224 625 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 DEFA11P-201ENST00000446470 261 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC138866.2-201ENST00000508650 584 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 SEC11B-201ENST00000518383 499 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 PCNAP4-201ENST00000532690 730 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 MTND2P17-201ENST00000550281 688 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AL591767.3-201ENST00000554632 525 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC004825.1-201ENST00000555068 586 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC139493.1-201ENST00000604368 397 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 KATNBL1P5-201ENST00000605015 517 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC135178.6-201ENST00000605314 398 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC097467.4-201ENST00000605504 141 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC110792.3-201ENST00000595906 1614 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 AC027088.4-201ENST00000611559 1947 ntBASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
SMC1BQ8NDV3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 RN7SKP124-201ENST00000364730 341 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 RPL35AP28-201ENST00000459730 331 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC005532.2-201ENST00000467154 373 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC078857.1-201ENST00000469870 667 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 CBX1P5-201ENST00000475330 559 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC090543.1-201ENST00000492168 485 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 SSR3-208ENST00000496050 579 ntTSL 4 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC008953.1-201ENST00000497334 318 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC023818.1-201ENST00000498379 384 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC110760.3-202ENST00000515177 371 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 VTA1P2-201ENST00000520205 911 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 HMGN2P6-201ENST00000551091 273 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AL158211.1-201ENST00000566763 763 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms