Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
VPS8Q8N3P4 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC8.78□□□□□ -1
VPS8Q8N3P4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
VPS8Q8N3P4 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.78□□□□□ -1
VPS8Q8N3P4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
VPS8Q8N3P4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC8.77□□□□□ -1
VPS8Q8N3P4 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
VPS8Q8N3P4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 RN7SKP162-201ENST00000363605 345 ntBASIC8.77□□□□□ -1.01
VPS8Q8N3P4 RNA5SP339-201ENST00000390987 122 ntBASIC8.77□□□□□ -1.01
VPS8Q8N3P4 RNF10P1-201ENST00000418589 369 ntBASIC8.77□□□□□ -1.01
VPS8Q8N3P4 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 OR10T1P-201ENST00000424327 947 ntBASIC8.77□□□□□ -1.01
VPS8Q8N3P4 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 AC108693.1-201ENST00000496068 432 ntBASIC8.77□□□□□ -1.01
VPS8Q8N3P4 RPL7L1P4-201ENST00000513004 707 ntBASIC8.77□□□□□ -1.01
VPS8Q8N3P4 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 AC000068.2-201ENST00000608816 460 ntBASIC8.77□□□□□ -1.01
VPS8Q8N3P4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 AC073365.1-203ENST00000641055 1992 ntBASIC8.77□□□□□ -1.01
VPS8Q8N3P4 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.77□□□□□ -1.01
VPS8Q8N3P4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AL034549.2-201ENST00000618285 3373 ntBASIC8.76□□□□□ -1.01
VPS8Q8N3P4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 MAPK10-338ENST00000641647 3362 ntBASIC8.76□□□□□ -1.01
VPS8Q8N3P4 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AL590399.2-201ENST00000427536 309 ntBASIC8.76□□□□□ -1.01
VPS8Q8N3P4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 RPS26P41-201ENST00000450370 284 ntBASIC8.76□□□□□ -1.01
VPS8Q8N3P4 RPEP1-201ENST00000504507 658 ntBASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AC021106.1-201ENST00000509020 1058 ntBASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AP001267.4-201ENST00000602598 545 ntBASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AC009237.13-201ENST00000603193 276 ntBASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 MARK2P4-201ENST00000503381 2380 ntBASIC8.76□□□□□ -1.01
VPS8Q8N3P4 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.76□□□□□ -1.01
VPS8Q8N3P4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
VPS8Q8N3P4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 AC107980.1-201ENST00000558671 3355 ntBASIC8.75□□□□□ -1.01
VPS8Q8N3P4 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 Z68694.1-201ENST00000413929 841 ntBASIC8.75□□□□□ -1.01
VPS8Q8N3P4 NPM1P4-201ENST00000414095 812 ntBASIC8.75□□□□□ -1.01
VPS8Q8N3P4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 RPS23P9-201ENST00000448848 438 ntBASIC8.75□□□□□ -1.01
VPS8Q8N3P4 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 AP001357.1-201ENST00000586304 1053 ntBASIC8.75□□□□□ -1.01
VPS8Q8N3P4 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 AC018809.2-201ENST00000602436 3823 ntBASIC8.75□□□□□ -1.01
VPS8Q8N3P4 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC8.75□□□□□ -1.01
VPS8Q8N3P4 MAPK10-261ENST00000641050 3109 ntBASIC8.75□□□□□ -1.01
VPS8Q8N3P4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms