Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 UBE2NP1-201ENST00000545592 458 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 NF1P12-201ENST00000549593 583 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AL132640.2-202ENST00000559732 614 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 EEF1B2P1-201ENST00000567221 672 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 RN7SL667P-201ENST00000582817 298 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AL049840.5-201ENST00000602827 552 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC023206.1-201ENST00000605824 298 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 RN7SL778P-201ENST00000607160 297 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 TSHZ2-205ENST00000626626 670 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC011379.1-201ENST00000508713 3025 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 MTCO1P6-201ENST00000481192 1384 ntBASIC6.53□□□□□ -1.36
ATG4DQ86TL0 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.53□□□□□ -1.36
ATG4DQ86TL0 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
ATG4DQ86TL0 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
ATG4DQ86TL0 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.36
ATG4DQ86TL0 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AL356317.1-201ENST00000396110 1436 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 RN7SKP107-201ENST00000364157 290 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC068138.1-201ENST00000412635 217 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 RPL17P17-201ENST00000419491 557 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 CYP4F32P-201ENST00000426492 504 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 RAC1P8-201ENST00000427086 527 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 ARAFP2-201ENST00000440565 559 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AL137845.2-201ENST00000444292 988 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 NFU1P2-201ENST00000448700 469 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC093799.1-201ENST00000452411 499 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 MEF2AP1-201ENST00000454867 863 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC092989.1-201ENST00000481235 277 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 NIPA2P2-201ENST00000496376 1083 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 RN7SL775P-201ENST00000498361 336 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 PABPC1P1-201ENST00000506347 591 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 NACAP5-201ENST00000509863 636 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 RNA5SP303-201ENST00000516192 130 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC092709.1-201ENST00000521355 1045 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.52□□□□□ -1.37
ATG4DQ86TL0 IGHVII-49-1-201ENST00000521760 224 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 HNRNPCP8-201ENST00000528764 888 ntBASIC6.52□□□□□ -1.37
ATG4DQ86TL0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms