Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS13CQ709C8 AC007938.2-201ENST00000604666 2634 ntBASIC4.46□□□□□ -1.7
VPS13CQ709C8 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 AC245028.1-201ENST00000423259 256 ntBASIC4.46□□□□□ -1.7
VPS13CQ709C8 AL731534.1-201ENST00000434711 269 ntBASIC4.46□□□□□ -1.7
VPS13CQ709C8 AL162739.1-201ENST00000450606 307 ntBASIC4.46□□□□□ -1.7
VPS13CQ709C8 AL121594.2-201ENST00000541658 472 ntBASIC4.46□□□□□ -1.7
VPS13CQ709C8 AL392048.1-201ENST00000613946 534 ntBASIC4.46□□□□□ -1.7
VPS13CQ709C8 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 JADE1-214ENST00000611140 5648 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS13CQ709C8 ST3GAL1-201ENST00000399640 6764 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS13CQ709C8 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS13CQ709C8 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS13CQ709C8 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS13CQ709C8 OR7E122P-202ENST00000641144 6171 ntBASIC4.46□□□□□ -1.7
VPS13CQ709C8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 AL109766.1-201ENST00000555080 552 ntBASIC4.46□□□□□ -1.7
VPS13CQ709C8 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS13CQ709C8 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS13CQ709C8 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 AL034546.1-201ENST00000623740 3693 ntBASIC4.46□□□□□ -1.7
VPS13CQ709C8 HS6ST3-202ENST00000620595 7073 ntBASIC4.46□□□□□ -1.7
VPS13CQ709C8 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS13CQ709C8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VPS13CQ709C8 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
VPS13CQ709C8 MAPK10-270ENST00000641102 3538 ntBASIC4.46□□□□□ -1.7
VPS13CQ709C8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VPS13CQ709C8 AL078599.1-201ENST00000402075 293 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 MIR1182-201ENST00000408363 97 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC069213.2-201ENST00000420238 366 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 RPL36AP15-201ENST00000444514 266 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC044797.1-201ENST00000445744 679 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC010435.1-201ENST00000623353 1177 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC091046.3-201ENST00000631455 1574 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 RNU1-24P-201ENST00000364285 165 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 NUDT19P3-201ENST00000404698 555 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 FTH1P8-201ENST00000498161 514 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC004980.4-201ENST00000513375 203 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC095055.1-201ENST00000603472 1113 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC090607.5-201ENST00000615692 224 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 ZFYVE26-207ENST00000555452 7309 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 IQCB2P-201ENST00000401788 1633 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 RNU1-146P-201ENST00000364015 165 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AL049697.2-201ENST00000403708 294 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AL359265.2-201ENST00000434367 631 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC112498.1-201ENST00000444401 332 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 TOMM22P4-201ENST00000511318 336 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC136624.4-201ENST00000573044 370 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 AC012414.7-202ENST00000622705 1090 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 POLR1B-217ENST00000541869 5059 ntTSL 2 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 MBP-206ENST00000397863 4800 ntTSL 3 BASIC4.45□□□□□ -1.7
VPS13CQ709C8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms