Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 MTND4P21-201ENST00000453886 1357 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 KRT8P51-201ENST00000438938 274 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AL158053.1-201ENST00000441503 453 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 BMS1P10-201ENST00000443754 1120 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 EEF1B2P3-201ENST00000447718 678 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 FRG2FP-204ENST00000453982 852 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 IGKV2-19-201ENST00000518132 283 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AL132657.2-201ENST00000564417 358 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 TXNP4-201ENST00000575018 310 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC006115.2-201ENST00000596823 202 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AL391834.2-201ENST00000609982 546 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 MIR6889-201ENST00000613185 59 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AL512506.1-201ENST00000613918 449 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AC090772.4-201ENST00000623599 362 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 Z95114.1-201ENST00000624264 14574 ntBASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZNF549Q6P9A3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AC233968.1-201ENST00000611212 1300 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 MIPEPP2-201ENST00000422560 1819 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 RNFT1P3-201ENST00000340898 1052 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 RN7SKP128-201ENST00000364270 303 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 SNORA72.3-201ENST00000365074 132 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 OR51A6P-201ENST00000418680 1004 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 RSU1P1-201ENST00000453416 441 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AC115223.1-201ENST00000466377 870 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AL157777.1-201ENST00000468100 304 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 RN7SKP183-201ENST00000517169 324 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AC126615.2-201ENST00000553003 515 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 GARSP1-201ENST00000570895 719 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 DNAJC19P3-201ENST00000594491 331 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AC245884.10-201ENST00000597355 337 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AL357094.1-201ENST00000603845 844 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AC015802.5-201ENST00000607478 399 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AC092266.1-201ENST00000610958 165 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AC097655.1-201ENST00000635075 318 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 OR11H2-202ENST00000641517 1085 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 OR8A1-204ENST00000642111 1145 ntBASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.84□□□□□ -1.47
ZNF549Q6P9A3 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
ZNF549Q6P9A3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms