Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC090774.2-201ENST00000584708 322 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC8.79□□□□□ -1
VARS2Q5ST30 AC104010.1-201ENST00000616889 150 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 MED15P6-202ENST00000621415 787 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 AP006248.2-201ENST00000623309 592 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.79□□□□□ -1
VARS2Q5ST30 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC8.79□□□□□ -1
VARS2Q5ST30 AC108724.2-201ENST00000634593 290 ntBASIC8.79□□□□□ -1
VARS2Q5ST30 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 CLSTN2-AS1-201ENST00000513309 2693 ntTSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
VARS2Q5ST30 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC8.79□□□□□ -1
VARS2Q5ST30 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
VARS2Q5ST30 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
VARS2Q5ST30 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC8.79□□□□□ -1
VARS2Q5ST30 SEPT4-202ENST00000317268 1784 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 ABRAXAS1-201ENST00000321945 4291 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC8.78□□□□□ -1
VARS2Q5ST30 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
VARS2Q5ST30 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 HERC2P8-202ENST00000564334 3705 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 SERPINB2-201ENST00000299502 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC8.78□□□□□ -1
VARS2Q5ST30 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 ZNF807-201ENST00000328088 1707 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
VARS2Q5ST30 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 RNU6-238P-201ENST00000363313 106 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC8.78□□□□□ -1
VARS2Q5ST30 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 RNU6-1032P-201ENST00000384100 107 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC8.78□□□□□ -1
VARS2Q5ST30 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC8.78□□□□□ -1
VARS2Q5ST30 AL589994.1-201ENST00000404962 340 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 MIR1231-201ENST00000408101 92 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC8.78□□□□□ -1
VARS2Q5ST30 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC8.78□□□□□ -1
VARS2Q5ST30 AL049758.1-201ENST00000423154 397 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 SLIT1-AS1-201ENST00000424428 689 ntTSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 RPL19P21-201ENST00000424919 591 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 ISCA1P6-201ENST00000427740 390 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC8.78□□□□□ -1
VARS2Q5ST30 AC092013.1-201ENST00000438795 332 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 RPS19P6-201ENST00000441327 433 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 AL512605.1-202ENST00000441919 381 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 HIGD1AP16-201ENST00000450986 258 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC8.78□□□□□ -1
VARS2Q5ST30 AC135721.2-201ENST00000464237 300 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 AC004801.2-201ENST00000468202 779 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 AC092324.1-201ENST00000468671 324 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 AL355076.1-201ENST00000484315 270 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 CR383656.1-201ENST00000484916 377 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 RPL17P2-201ENST00000491913 451 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 AC138409.2-202ENST00000507274 458 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC8.78□□□□□ -1
VARS2Q5ST30 LINC01170-201ENST00000519703 406 ntTSL 5 BASIC8.78□□□□□ -1
VARS2Q5ST30 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC8.78□□□□□ -1
VARS2Q5ST30 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC8.78□□□□□ -1
VARS2Q5ST30 RPL21P5-201ENST00000554662 472 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.78□□□□□ -1
VARS2Q5ST30 AC026464.5-201ENST00000562497 722 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.78□□□□□ -1
VARS2Q5ST30 AL078601.3-201ENST00000573303 535 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 AC136618.2-201ENST00000575091 400 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 KPNA2P3-201ENST00000584190 848 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC8.78□□□□□ -1
VARS2Q5ST30 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC8.78□□□□□ -1
VARS2Q5ST30 VDAC1P5-201ENST00000603132 844 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 AC087763.1-201ENST00000603391 286 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 YTHDF2P1-201ENST00000604759 1271 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC8.78□□□□□ -1
VARS2Q5ST30 RN7SL301P-202ENST00000618767 298 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
VARS2Q5ST30 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 PREPL-204ENST00000409272 3030 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
VARS2Q5ST30 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC8.78□□□□□ -1
VARS2Q5ST30 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.78□□□□□ -1
VARS2Q5ST30 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
VARS2Q5ST30 AC068733.1-202ENST00000531479 2456 ntBASIC8.78□□□□□ -1
VARS2Q5ST30 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
VARS2Q5ST30 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC8.78□□□□□ -1
VARS2Q5ST30 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
VARS2Q5ST30 TP63-204ENST00000392460 1668 ntTSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms