Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC023968.1-201ENST00000560719 475 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC027229.1-201ENST00000583887 253 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 NPIPB1P-202ENST00000588786 828 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC010487.1-201ENST00000594408 1172 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC027334.1-201ENST00000603257 310 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC069234.4-201ENST00000621276 412 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 AC020978.9-201ENST00000624380 1141 ntBASIC6.38□□□□□ -1.39
CCDC38Q502W7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CCDC38Q502W7 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC38Q502W7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC38Q502W7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC38Q502W7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC38Q502W7 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC38Q502W7 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC38Q502W7 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC38Q502W7 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC38Q502W7 RN7SKP81-201ENST00000365603 331 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 SNORD94-201ENST00000386037 137 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AL445238.1-204ENST00000400311 463 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC234781.4-201ENST00000419384 244 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 OR6R1P-201ENST00000431838 940 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC128677.1-201ENST00000436016 442 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC007000.2-201ENST00000442564 487 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AL031681.1-201ENST00000443304 400 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC38Q502W7 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC021087.2-201ENST00000504656 1203 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 HMGB1P46-201ENST00000520062 610 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 OR4R2P-201ENST00000530815 597 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC037479.1-201ENST00000558361 625 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 FAM106CP-201ENST00000582212 507 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 MIR212-201ENST00000586026 110 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC005332.4-201ENST00000592752 579 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC025857.2-201ENST00000602711 238 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC005899.6-201ENST00000620729 297 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC211486.4-201ENST00000621495 113 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 AC097372.4-201ENST00000625025 466 ntBASIC6.37□□□□□ -1.39
CCDC38Q502W7 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CCDC38Q502W7 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.37□□□□□ -1.39
CCDC38Q502W7 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CCDC38Q502W7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 RANP4-201ENST00000413361 655 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.36□□□□□ -1.39
CCDC38Q502W7 MTCYBP7-201ENST00000419540 1134 ntBASIC6.36□□□□□ -1.39
CCDC38Q502W7 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms