Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC006530.1-201ENST00000555980 571 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 ZNF322P1-201ENST00000568013 1209 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC002069.2-201ENST00000603580 883 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 LSM1P2-201ENST00000604911 322 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 HIRAP1-201ENST00000605318 787 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 AL031601.1-201ENST00000605702 394 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC009779.8-202ENST00000607990 932 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AC024884.1-201ENST00000620583 399 ntBASIC5.08□□□□□ -1.6
HIST1H3AP68431 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.08□□□□□ -1.6
HIST1H3AP68431 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HIST1H3AP68431 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 RNA5SP273-201ENST00000362484 113 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 RNA5SP500-201ENST00000364486 119 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 RNU1-136P-201ENST00000384181 164 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 RN7SKP29-201ENST00000410957 272 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 RNGTTP1-201ENST00000420965 728 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 GAPDHP48-201ENST00000436626 961 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AMYP1-201ENST00000440059 1023 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 RPS17P15-201ENST00000475609 349 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 RN7SL57P-201ENST00000493687 290 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AC079905.1-201ENST00000549280 475 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 UGT2B24P-201ENST00000514441 1597 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HIST1H3AP68431 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.07□□□□□ -1.6
HIST1H3AP68431 MFSD8-219ENST00000641228 2559 ntBASIC5.07□□□□□ -1.6
HIST1H3AP68431 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIST1H3AP68431 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HIST1H3AP68431 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIST1H3AP68431 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HIST1H3AP68431 AL022311.1-201ENST00000623726 19416 ntBASIC5.06□□□□□ -1.6
HIST1H3AP68431 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIST1H3AP68431 PDZK1P1-202ENST00000425209 1350 ntBASIC5.06□□□□□ -1.6
HIST1H3AP68431 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HIST1H3AP68431 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HIST1H3AP68431 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIST1H3AP68431 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIST1H3AP68431 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HIST1H3AP68431 RNU1-150P-201ENST00000362491 162 ntBASIC5.06□□□□□ -1.6
HIST1H3AP68431 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIST1H3AP68431 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
HIST1H3AP68431 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HIST1H3AP68431 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.06□□□□□ -1.6
HIST1H3AP68431 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HIST1H3AP68431 AC242426.1-201ENST00000435270 960 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms