Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
VSX2P58304 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 AC026523.2-201ENST00000625039 7739 ntBASIC5.61□□□□□ -1.51
VSX2P58304 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VSX2P58304 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.6□□□□□ -1.51
VSX2P58304 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.6□□□□□ -1.51
VSX2P58304 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VSX2P58304 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.6□□□□□ -1.51
VSX2P58304 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 AC114876.1-201ENST00000490962 1366 ntBASIC5.6□□□□□ -1.51
VSX2P58304 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VSX2P58304 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 RNA5SP500-201ENST00000364486 119 ntBASIC5.6□□□□□ -1.51
VSX2P58304 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.6□□□□□ -1.51
VSX2P58304 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VSX2P58304 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.6□□□□□ -1.51
VSX2P58304 RN7SKP29-201ENST00000410957 272 ntBASIC5.6□□□□□ -1.51
VSX2P58304 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.6□□□□□ -1.51
VSX2P58304 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.6□□□□□ -1.51
VSX2P58304 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.6□□□□□ -1.51
VSX2P58304 DEFA9P-201ENST00000433042 285 ntBASIC5.6□□□□□ -1.51
VSX2P58304 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.6□□□□□ -1.51
VSX2P58304 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.6□□□□□ -1.51
VSX2P58304 UBFD1P1-201ENST00000473259 814 ntBASIC5.6□□□□□ -1.51
VSX2P58304 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.6□□□□□ -1.51
VSX2P58304 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.6□□□□□ -1.51
VSX2P58304 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.6□□□□□ -1.51
VSX2P58304 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.6□□□□□ -1.51
VSX2P58304 MIR2117-201ENST00000516780 80 ntBASIC5.6□□□□□ -1.51
VSX2P58304 IGLV3-30-201ENST00000524362 298 ntBASIC5.6□□□□□ -1.51
VSX2P58304 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.6□□□□□ -1.51
VSX2P58304 AC079600.1-201ENST00000550326 297 ntBASIC5.6□□□□□ -1.51
VSX2P58304 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.6□□□□□ -1.51
VSX2P58304 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.6□□□□□ -1.51
VSX2P58304 AC125494.2-201ENST00000602431 657 ntBASIC5.6□□□□□ -1.51
VSX2P58304 RPL12P48-201ENST00000605620 304 ntBASIC5.6□□□□□ -1.51
VSX2P58304 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.6□□□□□ -1.51
VSX2P58304 AP005431.1-201ENST00000618479 319 ntBASIC5.6□□□□□ -1.51
VSX2P58304 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
VSX2P58304 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
VSX2P58304 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VSX2P58304 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.6□□□□□ -1.51
VSX2P58304 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
VSX2P58304 AC004656.1-201ENST00000568479 4951 ntBASIC5.59□□□□□ -1.51
VSX2P58304 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VSX2P58304 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.59□□□□□ -1.51
VSX2P58304 AC130304.1-201ENST00000622942 2385 ntBASIC5.59□□□□□ -1.51
VSX2P58304 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
VSX2P58304 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VSX2P58304 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VSX2P58304 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
VSX2P58304 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
VSX2P58304 RNA5SP435-201ENST00000364044 108 ntBASIC5.59□□□□□ -1.51
VSX2P58304 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.59□□□□□ -1.51
VSX2P58304 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VSX2P58304 MRPL53P1-201ENST00000414323 319 ntBASIC5.59□□□□□ -1.51
VSX2P58304 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.59□□□□□ -1.51
VSX2P58304 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.59□□□□□ -1.51
VSX2P58304 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.59□□□□□ -1.51
VSX2P58304 RPL38P3-201ENST00000484463 213 ntBASIC5.59□□□□□ -1.51
VSX2P58304 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.59□□□□□ -1.51
VSX2P58304 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.59□□□□□ -1.51
VSX2P58304 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VSX2P58304 AC022826.1-201ENST00000519383 805 ntBASIC5.59□□□□□ -1.51
VSX2P58304 AC091078.2-201ENST00000557145 559 ntBASIC5.59□□□□□ -1.51
VSX2P58304 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.59□□□□□ -1.51
VSX2P58304 AC069234.4-201ENST00000621276 412 ntBASIC5.59□□□□□ -1.51
VSX2P58304 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.59□□□□□ -1.51
VSX2P58304 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.59□□□□□ -1.51
VSX2P58304 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VSX2P58304 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
VSX2P58304 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.59□□□□□ -1.51
VSX2P58304 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.59□□□□□ -1.51
VSX2P58304 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
VSX2P58304 AL049634.1-201ENST00000453770 1720 ntBASIC5.59□□□□□ -1.51
VSX2P58304 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.59□□□□□ -1.52
VSX2P58304 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
VSX2P58304 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VSX2P58304 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms