Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 CASC19-255ENST00000641733 1385 ntBASIC5.29□□□□□ -1.56
CLDN18P56856 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CLDN18P56856 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CLDN18P56856 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN18P56856 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN18P56856 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN18P56856 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN18P56856 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN18P56856 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN18P56856 AL445665.1-202ENST00000452436 324 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 PFN1P6-201ENST00000476786 399 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 RN7SKP288-201ENST00000516227 268 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 SNORA70.20-201ENST00000516848 126 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN18P56856 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CLDN18P56856 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 AC244502.2-201ENST00000543361 851 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN18P56856 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN18P56856 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN18P56856 AL049779.3-201ENST00000557141 606 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN18P56856 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN18P56856 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.28□□□□□ -1.56
CLDN18P56856 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN18P56856 RNU6-84P-201ENST00000607737 102 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 AL445670.1-201ENST00000618889 801 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 AL512356.3-201ENST00000623005 461 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.28□□□□□ -1.56
CLDN18P56856 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.28□□□□□ -1.56
CLDN18P56856 OR11H2-202ENST00000641517 1085 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 AC106872.5-201ENST00000508856 1416 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 AC068769.1-201ENST00000474767 2426 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CLDN18P56856 AC015689.2-201ENST00000528172 1738 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN18P56856 AC114876.1-201ENST00000490962 1366 ntBASIC5.28□□□□□ -1.56
CLDN18P56856 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.28□□□□□ -1.56
CLDN18P56856 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CLDN18P56856 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN18P56856 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 AC130304.1-201ENST00000622942 2385 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN18P56856 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN18P56856 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 MIR375-201ENST00000362103 64 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN18P56856 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN18P56856 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CLDN18P56856 RNA5SP251-201ENST00000410614 137 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 RN7SKP29-201ENST00000410957 272 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 MRPL53P1-201ENST00000414323 319 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 AK4P4-201ENST00000419465 646 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 NAP1L4P2-201ENST00000425958 899 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 RPL31P15-201ENST00000449770 338 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 SETP20-201ENST00000457046 852 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 AL445687.2-201ENST00000458156 728 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 AL603882.1-201ENST00000463059 681 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 AL157777.1-201ENST00000468100 304 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 AL355032.1-201ENST00000472981 438 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 AC099521.1-201ENST00000482557 334 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 RPL38P3-201ENST00000484463 213 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 RPL7P51-201ENST00000490532 749 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 AC105420.1-201ENST00000504389 582 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CLDN18P56856 RN7SKP67-201ENST00000515905 235 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN18P56856 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.27□□□□□ -1.57
CLDN18P56856 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN18P56856 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN18P56856 HNRNPCP1-201ENST00000556181 766 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN18P56856 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.27□□□□□ -1.57
CLDN18P56856 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.27□□□□□ -1.57
CLDN18P56856 AL355974.3-201ENST00000617383 467 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.27□□□□□ -1.57
CLDN18P56856 AC093671.1-201ENST00000624981 2929 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.27□□□□□ -1.57
CLDN18P56856 AC103703.1-201ENST00000634783 663 ntBASIC5.27□□□□□ -1.57
CLDN18P56856 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CLDN18P56856 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms