Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AP000547.3-204ENST00000588548 2523 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SLC6A12P48065 RNA5SP500-201ENST00000364486 119 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 RNA5SP91-201ENST00000390902 119 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC6A12P48065 AL356968.2-201ENST00000412769 1257 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC6A12P48065 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.65□□□□□ -1.5
SLC6A12P48065 DEFA9P-201ENST00000433042 285 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC6A12P48065 AMYP1-201ENST00000440059 1023 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC6A12P48065 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC6A12P48065 RPL5P10-201ENST00000445207 894 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.65□□□□□ -1.5
SLC6A12P48065 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SLC6A12P48065 AC093166.4-201ENST00000457867 318 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 AL122020.1-201ENST00000472287 459 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC6A12P48065 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SLC6A12P48065 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC6A12P48065 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.65□□□□□ -1.5
SLC6A12P48065 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC6A12P48065 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC6A12P48065 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.65□□□□□ -1.5
SLC6A12P48065 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC6A12P48065 AC079905.1-201ENST00000549280 475 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.65□□□□□ -1.5
SLC6A12P48065 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC6A12P48065 AC090888.3-201ENST00000558917 509 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 AL356801.1-201ENST00000559320 294 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC6A12P48065 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC6A12P48065 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.65□□□□□ -1.5
SLC6A12P48065 AC010615.3-201ENST00000597319 394 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.65□□□□□ -1.5
SLC6A12P48065 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC6A12P48065 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SLC6A12P48065 SNORA35B-201ENST00000607417 129 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 AP005212.4-201ENST00000614206 710 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 AC024884.1-201ENST00000620583 399 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 AC022400.9-201ENST00000623633 273 ntBASIC5.65□□□□□ -1.5
SLC6A12P48065 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.65□□□□□ -1.5
SLC6A12P48065 MFSD8-219ENST00000641228 2559 ntBASIC5.65□□□□□ -1.51
SLC6A12P48065 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A12P48065 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
SLC6A12P48065 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
SLC6A12P48065 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A12P48065 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A12P48065 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
SLC6A12P48065 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
SLC6A12P48065 AC092070.2-203ENST00000598377 3644 ntBASIC5.65□□□□□ -1.51
SLC6A12P48065 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
SLC6A12P48065 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A12P48065 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
SLC6A12P48065 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC6A12P48065 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
SLC6A12P48065 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SLC6A12P48065 RNA5SP273-201ENST00000362484 113 ntBASIC5.64□□□□□ -1.51
SLC6A12P48065 U3.10-201ENST00000364459 214 ntBASIC5.64□□□□□ -1.51
SLC6A12P48065 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SLC6A12P48065 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
SLC6A12P48065 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
SLC6A12P48065 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A12P48065 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A12P48065 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A12P48065 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A12P48065 RNU1-88P-201ENST00000459274 128 ntBASIC5.64□□□□□ -1.51
SLC6A12P48065 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.64□□□□□ -1.51
SLC6A12P48065 AC105384.2-201ENST00000508433 640 ntBASIC5.64□□□□□ -1.51
SLC6A12P48065 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC6A12P48065 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A12P48065 WBP1LP3-201ENST00000523033 208 ntBASIC5.64□□□□□ -1.51
SLC6A12P48065 AC130364.2-201ENST00000528639 604 ntBASIC5.64□□□□□ -1.51
SLC6A12P48065 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A12P48065 AC006530.1-201ENST00000555980 571 ntBASIC5.64□□□□□ -1.51
SLC6A12P48065 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
SLC6A12P48065 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A12P48065 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
SLC6A12P48065 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.64□□□□□ -1.51
SLC6A12P48065 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC6A12P48065 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A12P48065 MIR1910-201ENST00000636955 80 ntBASIC5.64□□□□□ -1.51
SLC6A12P48065 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.64□□□□□ -1.51
SLC6A12P48065 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.64□□□□□ -1.51
SLC6A12P48065 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.64□□□□□ -1.51
SLC6A12P48065 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SLC6A12P48065 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms