Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
APOBEC1P41238 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.46□□□□□ -1.54
APOBEC1P41238 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
APOBEC1P41238 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
APOBEC1P41238 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.46□□□□□ -1.54
APOBEC1P41238 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
APOBEC1P41238 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
APOBEC1P41238 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.45□□□□□ -1.54
APOBEC1P41238 AC119674.1-202ENST00000641333 1860 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.45□□□□□ -1.54
APOBEC1P41238 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 AL512283.1-201ENST00000606756 1384 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.45□□□□□ -1.54
APOBEC1P41238 MIR1275-201ENST00000408770 80 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 SEPT7P8-201ENST00000413308 775 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.45□□□□□ -1.54
APOBEC1P41238 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.45□□□□□ -1.54
APOBEC1P41238 AC023141.3-201ENST00000436698 278 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.45□□□□□ -1.54
APOBEC1P41238 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.45□□□□□ -1.54
APOBEC1P41238 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.45□□□□□ -1.54
APOBEC1P41238 MTND2P39-201ENST00000457230 764 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.45□□□□□ -1.54
APOBEC1P41238 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.45□□□□□ -1.54
APOBEC1P41238 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.45□□□□□ -1.54
APOBEC1P41238 AP003049.1-201ENST00000529418 457 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.45□□□□□ -1.54
APOBEC1P41238 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.45□□□□□ -1.54
APOBEC1P41238 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.45□□□□□ -1.54
APOBEC1P41238 AC002310.3-201ENST00000569728 723 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.45□□□□□ -1.54
APOBEC1P41238 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.45□□□□□ -1.54
APOBEC1P41238 HMGB1P51-201ENST00000605166 638 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 AP001437.1-201ENST00000608783 456 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 AC069234.4-201ENST00000621276 412 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 FO681491.1-202ENST00000623392 737 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 AC021766.1-201ENST00000624404 741 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
APOBEC1P41238 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 DDX6P1-205ENST00000441966 1436 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 RBPJP7-201ENST00000442803 1447 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
APOBEC1P41238 RBPJP5-201ENST00000449433 1447 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
APOBEC1P41238 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
APOBEC1P41238 AC104966.1-201ENST00000467010 1464 ntBASIC5.45□□□□□ -1.54
APOBEC1P41238 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.45□□□□□ -1.54
APOBEC1P41238 AC005725.1-201ENST00000577346 2607 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.44□□□□□ -1.54
APOBEC1P41238 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC107977.1-201ENST00000355745 939 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 SNORA51.9-201ENST00000384295 124 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
APOBEC1P41238 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.44□□□□□ -1.54
APOBEC1P41238 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.44□□□□□ -1.54
APOBEC1P41238 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 MRPS21P3-201ENST00000436696 262 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.44□□□□□ -1.54
APOBEC1P41238 RPSAP40-201ENST00000442343 891 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 VN1R48P-201ENST00000448149 1036 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 RAB28P3-201ENST00000448325 597 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AL445466.1-201ENST00000448432 357 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.44□□□□□ -1.54
APOBEC1P41238 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 ACA64.4-201ENST00000459070 127 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AC098847.1-201ENST00000473094 348 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AC128716.1-201ENST00000475129 166 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.44□□□□□ -1.54
APOBEC1P41238 RN7SL649P-201ENST00000496974 275 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.44□□□□□ -1.54
APOBEC1P41238 AK4P6-201ENST00000505168 528 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AC093225.1-201ENST00000506867 1408 ntBASIC5.44□□□□□ -1.54
APOBEC1P41238 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms