Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC8P31273 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HOXC8P31273 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 AC092724.1-201ENST00000624623 3397 ntBASIC6.38□□□□□ -1.39
HOXC8P31273 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
HOXC8P31273 RNA5SP183-201ENST00000362452 119 ntBASIC6.38□□□□□ -1.39
HOXC8P31273 RNA5SP234-201ENST00000363916 119 ntBASIC6.38□□□□□ -1.39
HOXC8P31273 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC8P31273 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC8P31273 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 UBE2V2P1-201ENST00000434717 398 ntBASIC6.38□□□□□ -1.39
HOXC8P31273 AL627308.1-201ENST00000435693 821 ntBASIC6.38□□□□□ -1.39
HOXC8P31273 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC8P31273 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC8P31273 AL450023.1-201ENST00000450868 751 ntBASIC6.38□□□□□ -1.39
HOXC8P31273 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC8P31273 RPL35AP19-201ENST00000469425 329 ntBASIC6.38□□□□□ -1.39
HOXC8P31273 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC8P31273 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC8P31273 AC008410.1-201ENST00000483777 339 ntBASIC6.38□□□□□ -1.39
HOXC8P31273 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC8P31273 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXC8P31273 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC8P31273 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC8P31273 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC8P31273 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC8P31273 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC8P31273 MIR132-201ENST00000591554 101 ntBASIC6.38□□□□□ -1.39
HOXC8P31273 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXC8P31273 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXC8P31273 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC8P31273 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 AL121768.1-201ENST00000613917 2544 ntBASIC6.38□□□□□ -1.39
HOXC8P31273 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXC8P31273 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HOXC8P31273 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXC8P31273 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC8P31273 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
HOXC8P31273 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
HOXC8P31273 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC8P31273 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 RAD17P2-201ENST00000451754 1977 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXC8P31273 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXC8P31273 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXC8P31273 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 AC114786.1-201ENST00000512892 1415 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 SNORA58B-201ENST00000364259 136 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 RNA5SP30-201ENST00000365552 115 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC8P31273 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 RNU6-171P-201ENST00000384354 107 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 MIR105-2-201ENST00000385083 81 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 AP003170.5-201ENST00000397185 335 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 AC116036.1-201ENST00000412199 367 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 MTATP6P19-201ENST00000413797 659 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC8P31273 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC8P31273 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC8P31273 AC007386.1-201ENST00000455212 582 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 RN7SL515P-201ENST00000463999 297 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 EIF1P7-201ENST00000487533 337 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.37□□□□□ -1.39
HOXC8P31273 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXC8P31273 AL133372.1-201ENST00000493565 745 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 AC074255.1-201ENST00000511259 501 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 BX510359.5-201ENST00000515651 304 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 MIR2117-201ENST00000516780 80 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC8P31273 HSPE1P2-201ENST00000554777 306 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 AC234775.3-201ENST00000564612 656 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 AC015720.2-201ENST00000567709 334 ntBASIC6.37□□□□□ -1.39
HOXC8P31273 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HOXC8P31273 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXC8P31273 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HOXC8P31273 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXC8P31273 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
HOXC8P31273 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXC8P31273 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HOXC8P31273 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms