Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SNORA51.8-201ENST00000384234 132 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.68□□□□□ -1.34
COL4A5P29400 AC016397.1-201ENST00000412463 242 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 RPSAP35-201ENST00000413753 818 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 AC093162.1-201ENST00000419682 124 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL4A5P29400 RHOT1P3-201ENST00000436571 331 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 AC006466.1-201ENST00000438721 289 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 AL606490.8-201ENST00000441624 319 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 AC011742.2-201ENST00000443818 352 ntBASIC6.68□□□□□ -1.34
COL4A5P29400 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.68□□□□□ -1.34
COL4A5P29400 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.68□□□□□ -1.34
COL4A5P29400 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.68□□□□□ -1.34
COL4A5P29400 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.68□□□□□ -1.34
COL4A5P29400 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
COL4A5P29400 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
COL4A5P29400 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.67□□□□□ -1.34
COL4A5P29400 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
COL4A5P29400 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
COL4A5P29400 PANDAR-201ENST00000629595 1506 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.67□□□□□ -1.34
COL4A5P29400 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
COL4A5P29400 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 RNA5SP326-201ENST00000363209 110 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 RN7SKP6-201ENST00000364795 319 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A5P29400 RNA5SP91-201ENST00000390902 119 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 AL035419.1-201ENST00000397037 564 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 CEACAMP9-201ENST00000442990 513 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 AC011753.3-201ENST00000443436 406 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.67□□□□□ -1.34
COL4A5P29400 AC008897.1-201ENST00000494006 347 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 BNIP3P1-201ENST00000547295 580 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 AC209154.1-201ENST00000582156 337 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 MIR4697-201ENST00000582977 78 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 AF230666.2-201ENST00000602328 725 ntBASIC6.67□□□□□ -1.34
COL4A5P29400 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
COL4A5P29400 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COL4A5P29400 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.67□□□□□ -1.34
COL4A5P29400 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL4A5P29400 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.66□□□□□ -1.34
COL4A5P29400 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.66□□□□□ -1.34
COL4A5P29400 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A5P29400 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
COL4A5P29400 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC6.66□□□□□ -1.34
COL4A5P29400 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
COL4A5P29400 SNORA17.1-201ENST00000362945 126 ntBASIC6.66□□□□□ -1.34
COL4A5P29400 RNA5SP123-201ENST00000363244 119 ntBASIC6.66□□□□□ -1.34
COL4A5P29400 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A5P29400 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A5P29400 RN7SKP126-201ENST00000411143 300 ntBASIC6.66□□□□□ -1.34
COL4A5P29400 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A5P29400 TRY2P-201ENST00000448860 689 ntBASIC6.66□□□□□ -1.34
COL4A5P29400 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A5P29400 RN7SKP147-201ENST00000517154 244 ntBASIC6.66□□□□□ -1.34
COL4A5P29400 RNA5SP373-201ENST00000517271 95 ntBASIC6.66□□□□□ -1.34
COL4A5P29400 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.66□□□□□ -1.34
COL4A5P29400 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A5P29400 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.66□□□□□ -1.34
COL4A5P29400 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.66□□□□□ -1.34
COL4A5P29400 WBP1LP8-201ENST00000617401 327 ntBASIC6.66□□□□□ -1.34
COL4A5P29400 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A5P29400 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A5P29400 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A5P29400 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A5P29400 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
COL4A5P29400 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A5P29400 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
COL4A5P29400 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.66□□□□□ -1.34
COL4A5P29400 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.66□□□□□ -1.34
COL4A5P29400 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A5P29400 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A5P29400 AP004289.1-201ENST00000436307 2205 ntBASIC6.66□□□□□ -1.34
COL4A5P29400 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.66□□□□□ -1.34
COL4A5P29400 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL4A5P29400 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A5P29400 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.65□□□□□ -1.34
COL4A5P29400 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.65□□□□□ -1.34
COL4A5P29400 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A5P29400 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A5P29400 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL4A5P29400 MIR551A-201ENST00000385042 96 ntBASIC6.65□□□□□ -1.34
COL4A5P29400 AC068138.1-201ENST00000412635 217 ntBASIC6.65□□□□□ -1.34
COL4A5P29400 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.65□□□□□ -1.34
COL4A5P29400 AK3P5-201ENST00000432033 519 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms