Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.37□□□□□ -1.39
RB1P06400 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.37□□□□□ -1.39
RB1P06400 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
RB1P06400 AL590763.1-201ENST00000398297 1545 ntBASIC6.37□□□□□ -1.39
RB1P06400 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.37□□□□□ -1.39
RB1P06400 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RB1P06400 SETP9-201ENST00000423837 832 ntBASIC6.37□□□□□ -1.39
RB1P06400 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.37□□□□□ -1.39
RB1P06400 AL022331.1-201ENST00000429025 477 ntBASIC6.37□□□□□ -1.39
RB1P06400 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.37□□□□□ -1.39
RB1P06400 AL445928.1-201ENST00000435545 222 ntBASIC6.37□□□□□ -1.39
RB1P06400 AC008629.2-201ENST00000503783 483 ntBASIC6.37□□□□□ -1.39
RB1P06400 RNU6-615P-201ENST00000516065 106 ntBASIC6.37□□□□□ -1.39
RB1P06400 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC6.37□□□□□ -1.39
RB1P06400 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.37□□□□□ -1.39
RB1P06400 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.37□□□□□ -1.39
RB1P06400 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.37□□□□□ -1.39
RB1P06400 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.37□□□□□ -1.39
RB1P06400 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.37□□□□□ -1.39
RB1P06400 AC118658.2-201ENST00000618697 459 ntBASIC6.37□□□□□ -1.39
RB1P06400 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.37□□□□□ -1.39
RB1P06400 AC241377.1-201ENST00000619797 406 ntBASIC6.37□□□□□ -1.39
RB1P06400 AC012254.5-201ENST00000623573 478 ntBASIC6.37□□□□□ -1.39
RB1P06400 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.37□□□□□ -1.39
RB1P06400 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.37□□□□□ -1.39
RB1P06400 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.37□□□□□ -1.39
RB1P06400 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RB1P06400 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
RB1P06400 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.37□□□□□ -1.39
RB1P06400 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.36□□□□□ -1.39
RB1P06400 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.36□□□□□ -1.39
RB1P06400 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 CDY11P-201ENST00000447168 1651 ntBASIC6.36□□□□□ -1.39
RB1P06400 CDY5P-201ENST00000411487 1580 ntBASIC6.36□□□□□ -1.39
RB1P06400 CDY9P-201ENST00000451397 1580 ntBASIC6.36□□□□□ -1.39
RB1P06400 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RB1P06400 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 AC235565.1-201ENST00000456962 1325 ntBASIC6.36□□□□□ -1.39
RB1P06400 SNORA70-201ENST00000384436 135 ntBASIC6.36□□□□□ -1.39
RB1P06400 MIR1286-201ENST00000408112 78 ntBASIC6.36□□□□□ -1.39
RB1P06400 MTND4LP21-201ENST00000415303 295 ntBASIC6.36□□□□□ -1.39
RB1P06400 NMD3P2-201ENST00000421815 761 ntBASIC6.36□□□□□ -1.39
RB1P06400 TNPO1P1-201ENST00000423641 1138 ntBASIC6.36□□□□□ -1.39
RB1P06400 CFL1P1-202ENST00000432948 411 ntBASIC6.36□□□□□ -1.39
RB1P06400 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 AC097523.2-201ENST00000435551 652 ntBASIC6.36□□□□□ -1.39
RB1P06400 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.36□□□□□ -1.39
RB1P06400 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 EEF1B2P6-201ENST00000445713 673 ntBASIC6.36□□□□□ -1.39
RB1P06400 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.36□□□□□ -1.39
RB1P06400 AC007386.1-201ENST00000455212 582 ntBASIC6.36□□□□□ -1.39
RB1P06400 COPS8P2-201ENST00000473228 627 ntBASIC6.36□□□□□ -1.39
RB1P06400 OR2AO1P-201ENST00000476497 403 ntBASIC6.36□□□□□ -1.39
RB1P06400 AC135999.1-201ENST00000478962 479 ntBASIC6.36□□□□□ -1.39
RB1P06400 DEFB109A-201ENST00000482450 265 ntBASIC6.36□□□□□ -1.39
RB1P06400 RN7SL184P-201ENST00000488308 297 ntBASIC6.36□□□□□ -1.39
RB1P06400 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.36□□□□□ -1.39
RB1P06400 AC021146.10-201ENST00000515628 706 ntBASIC6.36□□□□□ -1.39
RB1P06400 AP006245.2-201ENST00000522004 300 ntBASIC6.36□□□□□ -1.39
RB1P06400 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.36□□□□□ -1.39
RB1P06400 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.36□□□□□ -1.39
RB1P06400 AC007342.5-201ENST00000571340 2142 ntBASIC6.36□□□□□ -1.39
RB1P06400 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 MIR4700-201ENST00000578311 74 ntBASIC6.36□□□□□ -1.39
RB1P06400 AC119403.2-201ENST00000590960 598 ntBASIC6.36□□□□□ -1.39
RB1P06400 AC009303.3-201ENST00000591103 736 ntBASIC6.36□□□□□ -1.39
RB1P06400 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.36□□□□□ -1.39
RB1P06400 AL391597.1-201ENST00000618707 694 ntBASIC6.36□□□□□ -1.39
RB1P06400 AF117829.2-201ENST00000619538 361 ntBASIC6.36□□□□□ -1.39
RB1P06400 SAMMSON-227ENST00000642114 1199 ntBASIC6.36□□□□□ -1.39
RB1P06400 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RB1P06400 AP001541.1-201ENST00000623322 1904 ntBASIC6.36□□□□□ -1.39
RB1P06400 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RB1P06400 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms