Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.44□□□□□ -1.54
MT-ND1P03886 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
MT-ND1P03886 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 MIR188-201ENST00000385034 86 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 RN7SKP279-201ENST00000411383 298 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.44□□□□□ -1.54
MT-ND1P03886 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AC130360.1-201ENST00000425489 1117 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 AC099782.1-201ENST00000425889 474 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.44□□□□□ -1.54
MT-ND1P03886 LINC00328-2P-201ENST00000436585 219 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.44□□□□□ -1.54
MT-ND1P03886 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.44□□□□□ -1.54
MT-ND1P03886 TRIM60P16-201ENST00000444048 694 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.44□□□□□ -1.54
MT-ND1P03886 OR52Y1P-201ENST00000452418 828 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.44□□□□□ -1.54
MT-ND1P03886 RN7SL197P-201ENST00000466981 299 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 GLUD1P3-202ENST00000508551 200 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AC021146.10-201ENST00000515628 706 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AC130365.2-201ENST00000525882 1201 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.44□□□□□ -1.54
MT-ND1P03886 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.44□□□□□ -1.54
MT-ND1P03886 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 AL121594.2-201ENST00000541658 472 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.44□□□□□ -1.54
MT-ND1P03886 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.44□□□□□ -1.54
MT-ND1P03886 SMIM12P1-201ENST00000603004 274 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
MT-ND1P03886 AL080312.2-201ENST00000613001 630 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 MIR6133-201ENST00000617057 108 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 AL445670.1-201ENST00000618889 801 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 AL357562.1-201ENST00000624911 609 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
MT-ND1P03886 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
MT-ND1P03886 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.44□□□□□ -1.54
MT-ND1P03886 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.44□□□□□ -1.54
MT-ND1P03886 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 PROS2P-201ENST00000474651 1951 ntBASIC5.44□□□□□ -1.54
MT-ND1P03886 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
MT-ND1P03886 AL161912.4-201ENST00000623889 2468 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.43□□□□□ -1.54
MT-ND1P03886 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.43□□□□□ -1.54
MT-ND1P03886 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.43□□□□□ -1.54
MT-ND1P03886 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 AL022311.1-201ENST00000623726 19416 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
MT-ND1P03886 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 RN7SKP108-201ENST00000411367 328 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.43□□□□□ -1.54
MT-ND1P03886 PRUNEP1-201ENST00000425846 705 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.43□□□□□ -1.54
MT-ND1P03886 NPM1P18-201ENST00000434232 732 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.43□□□□□ -1.54
MT-ND1P03886 RPL12P49-201ENST00000441100 121 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 CEACAMP11-201ENST00000455211 583 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.43□□□□□ -1.54
MT-ND1P03886 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.43□□□□□ -1.54
MT-ND1P03886 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
MT-ND1P03886 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.43□□□□□ -1.54
MT-ND1P03886 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.43□□□□□ -1.54
MT-ND1P03886 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.43□□□□□ -1.54
MT-ND1P03886 CR383658.1-201ENST00000514609 734 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.43□□□□□ -1.54
MT-ND1P03886 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.43□□□□□ -1.54
MT-ND1P03886 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.43□□□□□ -1.54
MT-ND1P03886 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.43□□□□□ -1.54
MT-ND1P03886 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.43□□□□□ -1.54
MT-ND1P03886 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.43□□□□□ -1.54
MT-ND1P03886 AL163952.1-202ENST00000569625 600 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
MT-ND1P03886 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.43□□□□□ -1.54
MT-ND1P03886 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.43□□□□□ -1.54
MT-ND1P03886 WBP1LP12-201ENST00000604449 331 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 AC079791.1-201ENST00000605356 973 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.43□□□□□ -1.54
MT-ND1P03886 MIR6823-201ENST00000622118 61 ntBASIC5.43□□□□□ -1.54
MT-ND1P03886 OR11H2-202ENST00000641517 1085 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms