Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN9O95484 AC118758.1-202ENST00000454719 225 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN9O95484 AL122020.1-201ENST00000472287 459 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.59□□□□□ -1.51
CLDN9O95484 RN7SL193P-201ENST00000491708 276 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 OR7E157P-201ENST00000494376 911 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN9O95484 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN9O95484 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLDN9O95484 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN9O95484 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.59□□□□□ -1.51
CLDN9O95484 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLDN9O95484 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.59□□□□□ -1.51
CLDN9O95484 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN9O95484 AC107993.1-201ENST00000591343 684 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 AC009237.12-201ENST00000604755 742 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 AL589935.2-201ENST00000616471 1231 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 CXADRP3-202ENST00000617265 1100 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.59□□□□□ -1.51
CLDN9O95484 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.59□□□□□ -1.51
CLDN9O95484 AL355488.2-201ENST00000609909 2850 ntBASIC5.59□□□□□ -1.51
CLDN9O95484 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CLDN9O95484 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.59□□□□□ -1.52
CLDN9O95484 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN9O95484 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CLDN9O95484 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN9O95484 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CLDN9O95484 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CLDN9O95484 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN9O95484 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 AL121839.2-201ENST00000565058 6943 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN9O95484 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CLDN9O95484 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
CLDN9O95484 RNU1-136P-201ENST00000384181 164 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 MIR621-201ENST00000384919 96 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 RNU11-201ENST00000387069 134 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN9O95484 RN7SKP29-201ENST00000410957 272 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 AL354890.1-201ENST00000413730 346 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 BX284632.2-201ENST00000421091 399 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN9O95484 AL512605.1-202ENST00000441919 381 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 AL359955.2-201ENST00000445380 353 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 REG1CP-206ENST00000447469 496 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.58□□□□□ -1.52
CLDN9O95484 CST12P-201ENST00000457644 362 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 CR383656.1-201ENST00000484916 377 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 AC122718.2-201ENST00000505325 591 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 AC111000.5-201ENST00000506559 1178 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 GLUD1P3-202ENST00000508551 200 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 RNA5SP340-201ENST00000517132 107 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN9O95484 OR8Q1P-201ENST00000526467 655 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 PCNAP4-201ENST00000532690 730 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN9O95484 AC006530.1-201ENST00000555980 571 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN9O95484 AC026826.3-201ENST00000561747 158 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN9O95484 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN9O95484 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN9O95484 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.58□□□□□ -1.52
CLDN9O95484 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.58□□□□□ -1.52
CLDN9O95484 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN9O95484 AL360012.1-201ENST00000602813 131 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 AL031658.2-201ENST00000616850 651 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 AL035661.1-201ENST00000620459 1144 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.58□□□□□ -1.52
CLDN9O95484 AP001153.1-201ENST00000641024 338 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 AL034546.1-201ENST00000623740 3693 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 LYARP1-201ENST00000436977 1501 ntBASIC5.58□□□□□ -1.52
CLDN9O95484 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLDN9O95484 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CLDN9O95484 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CLDN9O95484 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.57□□□□□ -1.52
CLDN9O95484 AC114774.1-201ENST00000507410 1770 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CLDN9O95484 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLDN9O95484 AC140479.2-201ENST00000421567 3130 ntBASIC5.57□□□□□ -1.52
CLDN9O95484 PDZK1P1-202ENST00000425209 1350 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms