Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 AL663074.2-201ENST00000440621 479 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 AL500527.1-201ENST00000448532 255 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 AL389915.2-201ENST00000454576 441 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC112187.1-201ENST00000455837 479 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 TPRKBP1-201ENST00000456243 481 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC083982.1-201ENST00000485679 344 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 SNRPCP2-201ENST00000504370 475 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC087360.1-201ENST00000518788 616 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 TPM3P3-201ENST00000521343 354 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC007423.1-201ENST00000605009 627 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 AL021368.3-201ENST00000607119 578 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC009163.6-201ENST00000612367 342 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC003001.2-201ENST00000616294 831 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 AP003400.2-201ENST00000624036 666 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC012618.3-205ENST00000637896 1496 ntBASIC8.68□□□□□ -1.02
RAPGEF3O95398 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.68□□□□□ -1.02
RAPGEF3O95398 AC123769.2-201ENST00000624332 5984 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RAPGEF3O95398 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
RAPGEF3O95398 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RAPGEF3O95398 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RAPGEF3O95398 RNU4-2-201ENST00000365668 141 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RAPGEF3O95398 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
RAPGEF3O95398 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 SNORA40.4-201ENST00000390971 128 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 AL035419.1-201ENST00000397037 564 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 AL356967.1-201ENST00000406305 431 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 AC108075.1-201ENST00000424692 529 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 TPT1P13-201ENST00000449760 499 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 AC109462.1-201ENST00000491087 368 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 CCDC11P1-201ENST00000503137 1162 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RAPGEF3O95398 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RAPGEF3O95398 AC074050.1-201ENST00000563247 211 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 AL118522.2-201ENST00000616045 615 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 AC006213.6-201ENST00000623722 4179 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 AP002371.2-201ENST00000624450 503 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 AL356094.1-201ENST00000624663 1212 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 RFC1-217ENST00000639695 867 ntTSL 5 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RAPGEF3O95398 AP002364.1-201ENST00000623330 3386 ntBASIC8.67□□□□□ -1.02
RAPGEF3O95398 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
RAPGEF3O95398 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
RAPGEF3O95398 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 AC011493.1-201ENST00000596753 1632 ntBASIC8.66□□□□□ -1.02
RAPGEF3O95398 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 RNU4-23P-201ENST00000362839 140 ntBASIC8.66□□□□□ -1.02
RAPGEF3O95398 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 SETP10-201ENST00000424368 814 ntBASIC8.66□□□□□ -1.02
RAPGEF3O95398 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 RN7SL570P-201ENST00000484405 292 ntBASIC8.66□□□□□ -1.02
RAPGEF3O95398 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 OR4A42P-201ENST00000531397 938 ntBASIC8.66□□□□□ -1.02
RAPGEF3O95398 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
RAPGEF3O95398 AC012616.1-201ENST00000600294 197 ntBASIC8.66□□□□□ -1.02
RAPGEF3O95398 AC087783.2-201ENST00000605070 562 ntBASIC8.66□□□□□ -1.02
RAPGEF3O95398 AC007998.4-201ENST00000612496 2533 ntBASIC8.66□□□□□ -1.02
RAPGEF3O95398 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
RAPGEF3O95398 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms