Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UPK1AO00322 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.45□□□□□ -1.54
UPK1AO00322 HIRAP1-201ENST00000605318 787 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.45□□□□□ -1.54
UPK1AO00322 AC073593.1-201ENST00000624500 411 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 IFIT1P1-201ENST00000400497 1449 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
UPK1AO00322 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
UPK1AO00322 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.45□□□□□ -1.54
UPK1AO00322 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
UPK1AO00322 AC083899.1-201ENST00000454465 3819 ntBASIC5.45□□□□□ -1.54
UPK1AO00322 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
UPK1AO00322 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.45□□□□□ -1.54
UPK1AO00322 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
UPK1AO00322 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
UPK1AO00322 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
UPK1AO00322 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.44□□□□□ -1.54
UPK1AO00322 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
UPK1AO00322 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 RNA5SP273-201ENST00000362484 113 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 RN7SKP186-201ENST00000365371 303 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 RN7SKP69-201ENST00000365390 305 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
UPK1AO00322 RN7SKP29-201ENST00000410957 272 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 AC079809.1-201ENST00000415468 276 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 CAP1P2-201ENST00000417455 1409 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.44□□□□□ -1.54
UPK1AO00322 AL590399.4-201ENST00000436561 601 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.44□□□□□ -1.54
UPK1AO00322 AC110602.1-201ENST00000437414 318 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.44□□□□□ -1.54
UPK1AO00322 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.44□□□□□ -1.54
UPK1AO00322 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.44□□□□□ -1.54
UPK1AO00322 RN7SL168P-201ENST00000463821 279 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 AL122020.1-201ENST00000472287 459 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 AC099521.1-201ENST00000482557 334 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 RN7SL170P-201ENST00000487098 295 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 RPL37P23-201ENST00000492641 294 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 GAPDHP71-201ENST00000511530 1003 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.44□□□□□ -1.54
UPK1AO00322 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.44□□□□□ -1.54
UPK1AO00322 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.44□□□□□ -1.54
UPK1AO00322 AC027369.2-201ENST00000528030 440 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 PCNAP4-201ENST00000532690 730 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 OR4A43P-201ENST00000532938 908 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.44□□□□□ -1.54
UPK1AO00322 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.44□□□□□ -1.54
UPK1AO00322 AC006530.1-201ENST00000555980 571 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.44□□□□□ -1.54
UPK1AO00322 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.44□□□□□ -1.54
UPK1AO00322 AC027216.1-201ENST00000577726 685 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.44□□□□□ -1.54
UPK1AO00322 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.44□□□□□ -1.54
UPK1AO00322 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.44□□□□□ -1.54
UPK1AO00322 AL353729.2-201ENST00000605859 1249 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.44□□□□□ -1.54
UPK1AO00322 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 AC024884.1-201ENST00000620583 399 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.44□□□□□ -1.54
UPK1AO00322 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.44□□□□□ -1.54
UPK1AO00322 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
UPK1AO00322 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.44□□□□□ -1.54
UPK1AO00322 BX284613.1-201ENST00000452221 1641 ntBASIC5.44□□□□□ -1.54
UPK1AO00322 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.44□□□□□ -1.54
UPK1AO00322 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.43□□□□□ -1.54
UPK1AO00322 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.43□□□□□ -1.54
UPK1AO00322 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
UPK1AO00322 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.43□□□□□ -1.54
UPK1AO00322 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 AC007938.2-201ENST00000604666 2634 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
UPK1AO00322 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 RNA5SP477-201ENST00000362639 119 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 AC004386.1-201ENST00000393214 761 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 GPS2P1-201ENST00000411761 986 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.43□□□□□ -1.54
UPK1AO00322 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.43□□□□□ -1.54
UPK1AO00322 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.43□□□□□ -1.54
UPK1AO00322 NDUFS5P5-201ENST00000437256 321 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.43□□□□□ -1.54
UPK1AO00322 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.43□□□□□ -1.54
UPK1AO00322 AC019084.1-201ENST00000457337 432 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 AC093166.4-201ENST00000457867 318 ntBASIC5.43□□□□□ -1.54
UPK1AO00322 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UPK1AO00322 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.43□□□□□ -1.54
UPK1AO00322 RN7SL57P-201ENST00000493687 290 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms