Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC005261.2-201ENST00000593427 4258 ntBASIC5.48□□□□□ -1.53
NPIPA3F8WFD2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
NPIPA3F8WFD2 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NPIPA3F8WFD2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AL662795.2-201ENST00000624252 3706 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 OR52B3P-201ENST00000314715 928 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 TMSB4XP4-201ENST00000323496 618 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 RNU6-1331P-201ENST00000363658 106 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 RN7SKP81-201ENST00000365603 331 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 RNA5SP284-201ENST00000384547 118 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 SNRPEP6-201ENST00000407465 277 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AC245884.2-201ENST00000426257 404 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 NDUFS5P5-201ENST00000437256 321 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 REG1CP-206ENST00000447469 496 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 OR4A40P-201ENST00000533878 948 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AC023389.2-201ENST00000580031 955 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 RPL12P48-201ENST00000605620 304 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 AC127024.6-201ENST00000621598 424 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
NPIPA3F8WFD2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.53
NPIPA3F8WFD2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
NPIPA3F8WFD2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 SNORA17A-201ENST00000391185 133 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 OR5W1P-201ENST00000423705 938 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC016027.5-201ENST00000427227 210 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 TUBB4BP6-201ENST00000437576 479 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 MTND6P5-201ENST00000448266 512 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AL445466.1-201ENST00000448432 357 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 RPL23AP60-201ENST00000450011 454 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC016027.4-201ENST00000450866 277 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC011476.1-201ENST00000466725 307 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 CR383656.1-201ENST00000484916 377 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AGGF1P3-201ENST00000493675 1213 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 OR56A7P-201ENST00000524865 941 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AP000619.2-201ENST00000546014 969 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC090651.1-201ENST00000567865 634 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 RNU4ATAC-201ENST00000580972 127 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 AC011445.2-201ENST00000599274 173 ntBASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.46□□□□□ -1.54
NPIPA3F8WFD2 BNIP3P7-201ENST00000605641 516 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms